Candidatus Filomicrobium marinum Y: BN1229_v1_3122
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Entry
BN1229_v1_3122 CDS
T03857
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy02024
Quorum sensing
fiy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN1229_v1_3122 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN1229_v1_3122 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fiy03019
]
BN1229_v1_3122 (hfq)
03036 Chromosome and associated proteins [BR:
fiy03036
]
BN1229_v1_3122 (hfq)
Messenger RNA biogenesis [BR:
fiy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BN1229_v1_3122 (hfq)
Chromosome and associated proteins [BR:
fiy03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BN1229_v1_3122 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
CPR21604
UniProt:
A0A0D6JI68
LinkDB
All DBs
Position
1:3051225..3051479
Genome browser
AA seq
84 aa
AA seq
DB search
MPAERVQSLQDTFLNYVRKNKTPLTIFLINGVKLQGIVTWFDNFCVLLRRDGHSQLVYKH
AISTIMPGQPVHLMDVESTETTTG
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagagcgagtccaaagccttcaggacacattcctgaattacgtacgtaagaac
aaaactccattgacaattttccttatcaacggcgtaaagctacaaggcatcgtcacttgg
ttcgacaatttttgcgtgttgttgcgccgcgatggtcattcccagcttgtctacaaacac
gctatttcaaccatcatgccgggccagccagtacatttgatggatgtagaatccactgag
acaacgaccgggtag
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