Candidatus Filomicrobium marinum Y: BN1229_v1_3310
Help
Entry
BN1229_v1_3310 CDS
T03857
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy00250
Alanine, aspartate and glutamate metabolism
fiy00310
Lysine degradation
fiy00350
Tyrosine metabolism
fiy00650
Butanoate metabolism
fiy00760
Nicotinate and nicotinamide metabolism
fiy01100
Metabolic pathways
fiy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BN1229_v1_3310 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BN1229_v1_3310 (gabD)
00310 Lysine degradation
BN1229_v1_3310 (gabD)
00350 Tyrosine metabolism
BN1229_v1_3310 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BN1229_v1_3310 (gabD)
Enzymes [BR:
fiy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BN1229_v1_3310 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BN1229_v1_3310 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BN1229_v1_3310 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
CPR21877
UniProt:
A0A0D6JJJ6
LinkDB
All DBs
Position
1:complement(3231900..3233345)
Genome browser
AA seq
481 aa
AA seq
DB search
MDKKVMTLLKTQALIDGAWVGTPAMPVTDKATGEEIARVPDLGVAEAKAAIEAAHNAFPA
WSKLLAKERTAILRRWYELIIEHADELALLLSKEQGKPLSEARGEIMYGAGFVEFFAEQA
KRVYGETLPTFKAGARTVILKQPVGVVTAITPWNFPNAMITRKVSPALAVGCTAVVKPAE
DTPLSALALAELAVRAGVPKGVLNVITTADAATVGKELSTNPLVRVVTFTGSTEVGRILM
GQAASTIKKVSLELGGNAPFIVFDDADIDQAVAGALASKFRNAGQTCVCANRIYVQDKVY
DAFAEKLSAGAAKLKVGAGTESGVEIGPLINEAGIAKVEDHVADAVNKGARVLIGGSRHD
RGGTFFQPTVLANVDSSMKVTREETFGPVAPLFRFTDEADVVAQANDTQFGLAAYFYARD
IGRVWRVAEALEYGMVGVNEGVMSTELAPFGGVKQSGLGREGSHHGIEEFLDTKYVLMGG
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaggtcatgacgcttcttaagacgcaagctctcatcgatggggcttgggtt
ggcactcctgcgatgcctgttaccgacaaagcgaccggtgaagagattgcgcgcgtcccc
gatctcggcgtggctgaagcgaaagcagcgattgaggctgctcacaacgcatttccggcc
tggtcgaagcttcttgccaaggagcgcaccgccatcctacgccgttggtacgagctgatc
atcgaacatgcggatgagctggcgcttcttctttccaaagagcaaggaaagccactgagt
gaggcgcgcggtgagataatgtacggtgcgggctttgtcgaattcttcgccgagcaggcc
aagcgcgtttacggcgagacgctgccgaccttcaaggcaggggcgcgtacggttattttg
aaacagccagtcggtgtcgttacggcgatcacgccgtggaattttcccaatgcgatgatt
acacggaaagtcagtcccgcgctcgcggtgggatgcactgctgttgtgaagcctgcggag
gatacgcctctctctgcgctcgctcttgcagaacttgccgttcgtgctggtgttcccaaa
ggcgttttgaatgtcatcaccactgcggatgcggcgacggtcggcaaagaactgtcgacg
aatccgctggtacgtgtcgtcacattcacgggctcgacggaagtgggccgcattctcatg
gggcaagcggctagtacgatcaaaaaagtgtcgctggagctgggcgggaatgcgccgttc
atcgtgttcgacgatgcggatatcgatcaggccgttgcaggtgcgttggcttcgaagttc
cggaatgcgggtcaaacgtgcgtctgcgccaatcggatctatgtacaggacaaggtctat
gatgcttttgcggagaagctgtcagcaggggcggcgaagctcaaggttggggcaggtacg
gaatctggcgttgagattggcccactgatcaacgaagcaggcattgccaaggtggaagat
catgtcgccgatgctgtgaacaagggcgcacgtgttctcatcggcggaagccggcatgac
cgtggcggcacgtttttccagcctacggttctagcgaatgtcgattccagcatgaaggtg
acgcgggaagaaacattcggtcctgttgctcctctgttcaggttcactgacgaagccgac
gttgtcgcacaagccaacgatacgcagtttgggcttgcggcttacttctatgcgcgcgat
atcggtcgcgtttggcgtgtcgctgaggctctcgaatacggaatggttggtgtcaacgaa
ggtgtgatgtcgaccgaactggcccccttcggtggtgttaagcaatcgggcctggggcgt
gaaggctctcatcacggtatcgaggaatttcttgatacgaagtatgtgctgatgggtggt
ctttag
DBGET
integrated database retrieval system
