Candidatus Filomicrobium marinum Y: BN1229_v1_3971
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Entry
BN1229_v1_3971 CDS
T03857
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy00470
D-Amino acid metabolism
fiy00550
Peptidoglycan biosynthesis
fiy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN1229_v1_3971 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN1229_v1_3971 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fiy01011
]
BN1229_v1_3971 (murD)
Enzymes [BR:
fiy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BN1229_v1_3971 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
fiy01011
]
Precursor biosynthesis
Amino acid ligase
BN1229_v1_3971 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
KARI_N
2-Hacid_dh_C
AdoHcyase_NAD
NAD_binding_2
CbiA
Motif
Other DBs
NCBI-ProteinID:
CPR22538
UniProt:
A0A0D6JKP7
LinkDB
All DBs
Position
1:3873892..3875367
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AA seq
491 aa
AA seq
DB search
MIRATTFAGKTVAVFGLGGSGVAAAQSLVAGGADVAVWDDGVAAREAAAASGFKVVDLSS
ADWTTFAAFILAPGVPLTHPEPHWTVVKAREAGVEVIGDVELFCRARAMVAPKSAFIAIT
GTNGKSTTTALIAHLLRELGFDTQMGGNIGKAILTLEPPAQDRVHVVEMSSYQIDLTPSV
HPSVGVLLNVTPDHLDRHGTIEHYASVKERLVSAADAAVVAIDDKWTGQVAARLEDSGRL
YPITVGRGAVLVPRLYAIGSSLFVHEKSGSYATSEEVVQLDGIPSLRGAHNVQNALAALG
ALRALQELADRGEVELTVNGVPHRIWDIERIAQALKSFPGLAHRMEQVGQTDQVLFINDS
KATNADSTDKALSSFQGDIYWIAGGRAKSGGITSLAPHFGRIRRAYLIGEAENAFAQTLE
GQVDYVRCGSLEAAVTAAAHDAGLERGCETVVLFSPACASFDQFRNFEERGDAFRRIVEM
LPGVSKSRGTV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgcgacgacgtttgcgggcaagacggttgccgtcttcgggctgggcggttcg
ggcgtggcggctgcgcagtcgctggttgcgggcggcgctgacgtcgcggtctgggacgat
ggcgttgctgcgcgcgaggcggcggcagcttcgggcttcaaggttgtcgatctttcctca
gctgactggacaacatttgcagcgttcattctggcgccgggcgtacctctgacacatccg
gagccgcattggaccgtcgtgaaggcacgcgaagcgggtgttgaggtcatcggcgatgtt
gaattgttctgccgcgcgcgtgcgatggttgcgccgaaatctgcttttatcgcgatcacc
ggcacgaacggaaaatcgacgacaacggctctcatcgcacatctgcttcgcgaacttggt
ttcgacactcagatgggtggcaatatcggtaaggcgatcctcacgttagagccgcccgcg
caggatcgtgtgcacgtcgttgaaatgtcatcttatcaaattgatctgacaccctcggtt
catccgagcgttggtgtgctcctgaacgtgacgccggatcatctcgatcgccatggaacg
atagagcactacgccagcgttaaggagcgcctggtctccgcagctgacgccgctgtcgtc
gcgattgacgacaaatggacggggcaggtggcagcgcgtctggaagacagcggccggctt
tatccgatcaccgtaggtcggggggcggttctggtgcccaggctctacgccattggctca
agcctttttgtgcacgagaaatcaggttcctacgccaccagcgaggaggtggtgcagctc
gatggcatcccgtcattgcggggcgcacacaatgtgcaaaatgcgctggccgctttgggg
gcattgcgggctctgcaggaactggcggatcgaggtgaggtcgaactcaccgtgaatggg
gttccgcaccggatctgggatatcgagagaatcgctcaagcgctgaagagttttccaggt
cttgcgcatcgcatggagcaggtcggacagacggaccaggttcttttcatcaacgattcc
aaagcgaccaatgctgactcgacagataaggcgttgtcgtcgtttcaaggtgatatctat
tggattgccgggggacgcgcaaaaagcgggggaattacgtcgctcgcgccgcatttcggg
cgaattagacgcgcctatctgattggtgaagcagagaacgcgttcgctcagactttggag
gggcaggtcgattacgtccgttgtggttctctggaagcggccgtgacggcggcggcccat
gatgctgggcttgagcgtgggtgtgagacggttgtcctgttttcaccggcgtgtgcgtct
tttgatcagttccggaacttcgaggaacgcggagatgcctttcgcaggatcgtcgagatg
ctaccaggggtgagcaaaagccgaggaacggtatga
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