Candidatus Filomicrobium marinum Y: BN1229_v1_3997
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Entry
BN1229_v1_3997 CDS
T03857
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy03420
Nucleotide excision repair
fiy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN1229_v1_3997
03430 Mismatch repair
BN1229_v1_3997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fiy03400
]
BN1229_v1_3997
Enzymes [BR:
fiy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN1229_v1_3997
DNA repair and recombination proteins [BR:
fiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN1229_v1_3997
MMR (mismatch excision repair)
Other MMR factors
BN1229_v1_3997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DEAD
AAA_11
DUF3553
ResIII
Cytomega_TRL10
Motif
Other DBs
NCBI-ProteinID:
CPR22564
UniProt:
A0A0D6JKS1
LinkDB
All DBs
Position
1:complement(3904705..3907146)
Genome browser
AA seq
813 aa
AA seq
DB search
MPIEQQDDPPFDLPPNTESGAGTPGQAAPAHAQGSISQRALAKRPMSSSAAPYLDALNPE
QRAAVEALEGPVLVLAGAGTGKTRVLTTRIAHILETGRAYPSQILAVTFTNKAAREMKER
VERFVGSSVEGMPWLGTFHSIGVKILRRHAELVGLKQGFTILDVDDQLRLMKQVIEAEGL
DKDRWPARQLAAYIDRWKNRGLTPEKVPAGEAHAFAGGKGRELYAAYQRRLKELNAADFG
DLLLESLRLFMENPDILAQYHNRFRYILVDEYQDTNVAQYLWLRLLAQGSEKPNICCVGD
DDQSIYGWRGAEVDNILRFEQDFPGATVIRLERNYRSTAHILATASHLITANENRLGKTL
FTDGAAGNKVTVTGLWDDVEEARTVTDNIEALSKQGHQLNEIAILVRASFQMRVLEDRFV
TTGLPYRVIGGPRFYERAEIKDAIAYLEVTANPANDLKFERIINVPKRGLGDTSVKRVRE
LARASEIPLFAAAQSIIETEELSGKARRSLSDLVGQFERWRANAATMPHTELAKLILDES
GYTQMWQADKSPQAQSRLENLKELVHFMDDFDTLQGFLEHVSLVMDIDNASDGDRVSIMT
LHAAKGLEFDTVFLTGWEEGVFPSQRTLDESGQAGLEEERRLAYVGITRAKVSAHISFTQ
NRRNRGLYQSAIPSRFVDELPEAHVEVVEAKTPFGGAYQNFGGRFGGNPYGASRFDEAPA
AFQSSYATPGWQRAQKQWQSDSTTPPRRRAAPRTIEGELVASSTSESSFEMGERVFHQKF
GYGRISEIDGNKLTIDFEKSGRKRVVDSFVERH
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgaacagcaagacgacccaccctttgacctcccgccgaacacagagtccggc
gcaggaacacctgggcaggccgcacctgcgcacgcgcaaggctccatatcgcaacgtgcg
cttgcaaaacgcccgatgtcatcatcggcagcgccatacctcgatgcgctcaatccggaa
caacgtgctgcggtagaagctcttgagggacccgtcctcgtgcttgcgggggccggcacc
ggcaaaacacgtgtgctcaccacccgtatcgcccacatcctcgaaaccggtcgcgcctac
ccatcccaaatcctcgccgtaacatttacgaacaaagcagcgcgggagatgaaagagcgc
gtcgagcgctttgttggcagcagcgtcgaaggcatgccatggctgggcaccttccactcg
ataggcgtgaaaatcctgcgccgccacgccgaactcgtcggtttgaagcaaggcttcacg
atcctggacgtcgatgatcagctccgcctgatgaagcaggtgatcgaagctgaaggcttg
gacaaggatcgctggccggcccgtcagctcgccgcctacatagaccgctggaaaaaccgc
ggcctcacgccagaaaaggtgcccgccggcgaagctcacgcgtttgcaggcggcaaaggc
cgcgagctttacgccgcctaccaacgccgcttgaaggaattgaacgccgccgattttgga
gacctcctattggaaagcctcaggcttttcatggagaacccggatattctggcgcagtat
cacaaccgtttccgctacatcctcgtcgatgaataccaggacaccaacgtcgcccaatat
ctgtggctgcgtttgttggcgcagggctctgaaaaaccgaacatctgctgtgtcggcgat
gacgatcaatcgatttatggctggcgcggagccgaggtcgacaacatcctgcggtttgaa
caggacttccccggggcaaccgtcatccggctagaacggaattaccgctcgaccgcgcat
atcctggcaaccgcctcacatctcatcaccgccaacgagaaccgcctcggcaagacgctc
ttcaccgatggcgcagccggcaacaaagtcaccgtgaccggactatgggatgatgtagaa
gaagcccgcaccgttaccgacaacatcgaagccctgagcaagcaagggcaccagctgaac
gagatcgcgatcctcgtacgcgcatctttccagatgcgtgtactggaagaccgcttcgtc
acgacaggtttgccctaccgtgtcatcggcggcccacggttttatgagcgagccgaaatc
aaggatgcaatcgcctacctggaagtcacggccaatccggccaacgatcttaagttcgag
cgcatcatcaacgtgcccaagcgcggcctgggggacacatccgtcaaacgcgttcgcgaa
ttggcacgcgcaagcgagatcccgcttttcgccgcagcgcaatccatcatcgaaaccgaa
gagctgtccggcaaagcccgacgctcattgagcgaccttgtcgggcagttcgagcgctgg
cgagcaaacgccgcaaccatgcctcatacggagctggccaaactgatcctggacgagtcg
ggctacacccagatgtggcaggcggacaaaagcccgcaagcccagtcccgcttggaaaac
ctcaaggaactcgtacacttcatggatgatttcgatactcttcagggattccttgaacac
gtgtccttggtgatggatatcgacaacgcgagcgacggcgatcgcgtctccatcatgacg
ctgcatgccgccaagggcctggagtttgataccgtctttctaactggctgggaggaaggc
gtattcccgagccagcgtacgctcgatgaaagcggacaggccggactggaggaagagcgt
cgtctggcttatgtcggcatcacccgggccaaggtcagtgcacatatctccttcactcag
aaccggcgcaatcgtggtctctatcaatccgcgatcccctcacgcttcgtcgacgaactc
ccggaagctcacgtcgaggttgtcgaagctaaaacaccgttcggtggtgcgtatcagaat
tttggtgggcgcttcggaggcaacccttacggcgccagccgcttcgatgaggccccagcg
gcattccaatcgagctacgcgacgccgggctggcagcgcgcgcaaaaacagtggcaatca
gattcgacaacgcccccacgccgtcgcgcagccccacgcacgattgaaggcgaactcgtc
gcatcctcaacgagcgagtcctcatttgaaatgggagagcgggttttccatcaaaagttt
ggctatggccggatctcggaaatcgacggcaataagctcaccattgattttgagaaatcg
ggacgcaagcgcgtcgtcgactctttcgtcgagcgccactga
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