Flavobacterium anhuiense: BB050_00154
Help
Entry
BB050_00154 CDS
T04718
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fjg
Flavobacterium anhuiense
Brite
KEGG Orthology (KO) [BR:
fjg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fjg03009
]
BB050_00154 (rlmCD)
Enzymes [BR:
fjg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BB050_00154 (rlmCD)
Ribosome biogenesis [BR:
fjg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BB050_00154 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
TRM5-TYW2_MTfase
TRAM
Methyltransf_15
Alginate_lyase2
PrmA
PCMT
FtsJ
N6_N4_Mtase
Methyltransf_11
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AOC93310
UniProt:
A0AAC9GGC5
LinkDB
All DBs
Position
178323..179735
Genome browser
AA seq
470 aa
AA seq
DB search
MGRKNTDKVVFHQIQVLDAGAKGVSVAKAPDGKVIFIPNVVPGDVVDVQTLKKRKAYYEG
KAVKFHELSEYRVDPICEHFGVCGGCKWQNMKYSQQLAFKQNEVKNHLQRIGKIELPEFE
DILGSEKQFFYRNKMEFSFSNSRWLTEKEIGSTEDLGNRNALGFHIPKMWDKILDINKCH
LQEDPSNAIRNEIRAFANEHNLAFFNPREHSGLLRTVMIRTVSTGEIMVLIQFFEDDKEN
RELILDHLYEKFPQITSLQYVVNGKQNDTIYDQDVILYKGRDYILEEMEGLKFSINAKSF
YQTNSDQAYELYKITRDFAGLTGNETVYDLYTGTGTIAQFVSKKAKKVIGVESVPEAIID
AKANAERNNIRNCEFFVGDMKVVFNEAFIAQHGKPDVIITDPPRDGMHKDVVEQILKIAP
KRVVYVSCNSATQARDLALMDEKYKVTRVRPVDMFPQTHHVENVVLLELR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaaaatacagacaaagttgtctttcatcaaattcaagttcttgatgctggt
gcaaaaggggtttcagtagccaaagcacctgacggaaaagtaatctttattccgaatgtg
gtacctggagatgttgtagacgtacagacattaaaaaaaagaaaggcttactacgaaggt
aaagctgtaaaatttcacgaattatctgaatatagagtagatccgatctgcgaacatttt
ggagtgtgtggaggttgtaaatggcaaaatatgaaatacagccagcaacttgcatttaaa
caaaatgaagttaaaaatcacttacaaagaataggaaaaattgagcttccagaatttgaa
gatattttaggttctgagaaacagtttttctatagaaataaaatggaattttctttttct
aacagccgttggcttacagaaaaagaaattggaagcacggaagacttaggaaatagaaat
gctttaggattccatattccgaaaatgtgggataaaattcttgacatcaataaatgtcat
ctgcaagaagatccctcaaatgccattcgtaacgagatcagagcttttgcaaacgagcat
aatttagcattttttaatccaagagaacattctggattattgagaactgtcatgattcgt
actgtctctacaggagaaattatggttttaattcagttttttgaagatgacaaagaaaat
agagaattaattcttgaccatttatacgagaagtttccacaaatcacttctttacaatat
gtggtaaacggcaagcaaaatgacactatttacgatcaggatgttattctttacaaagga
agagattacattttagaagaaatggaaggtctaaaattcagcattaatgcaaagtctttc
taccagacaaattctgaccaagcctacgaattatacaaaataacacgtgattttgctggt
cttacaggaaacgagacggtttatgacttatatacaggaacagggacaattgctcaattc
gtttctaaaaaagcaaaaaaagtaatcggagtagaaagtgttccagaagctattattgat
gctaaagccaatgcagaacgcaataatattagaaattgcgagttttttgttggtgacatg
aaagtagtctttaacgaagcttttattgcacaacacggaaaaccagatgttattattaca
gacccgcctcgcgacggaatgcataaagatgtagtggagcaaattttaaaaattgcacca
aaaagagtagtttatgtaagctgtaattctgcaactcaagcacgtgacttagctttaatg
gatgaaaaatacaaagtgacacgagtgagacctgttgacatgtttccgcagacgcatcat
gttgaaaatgttgtacttttagaacttcgataa
DBGET
integrated database retrieval system
