Flavobacterium anhuiense: BB050_02234
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Entry
BB050_02234 CDS
T04718
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fjg
Flavobacterium anhuiense
Pathway
fjg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fjg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BB050_02234 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fjg03019
]
BB050_02234 (recQ_2)
03400 DNA repair and recombination proteins [BR:
fjg03400
]
BB050_02234 (recQ_2)
Enzymes [BR:
fjg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BB050_02234 (recQ_2)
Messenger RNA biogenesis [BR:
fjg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BB050_02234 (recQ_2)
DNA repair and recombination proteins [BR:
fjg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BB050_02234 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AOC95350
UniProt:
A0AAC9GIA4
LinkDB
All DBs
Position
2529820..2532015
Genome browser
AA seq
731 aa
AA seq
DB search
MNSNEIEIHKELKKYFGFSQFKGLQEQVITSILDGKNTFVIMPTGGGKSLCYQLPALIQE
GTAIVVSPLIALMKNQVDAIRSLSSENGIAHVLNSSLTKTEIAQVKKDITSGLTKLLYVA
PESLTKEEYVAFLQSVPISFVAIDEAHCISEWGHDFRPEYRNLRNIIKQLGKVPIIGLTA
TATPKVQEDILKNLDMADANTFKASFNRPNLYYEVRTKTKNIESDIIRFIKQHKGKSGII
YCLSRKKVESIAEVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGID
KPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDVEKLEKFMSGKPVAEQE
IGFALLQEVVAYAETSMSRRKFLLHYFGEEFDSETGEGADMDDNVRNPKHKVEAKDQVVK
LLEIVRDTKHIYKSKEIVFTLIGRINAVIKAHKTDTQPYFGSGSDHDEKYWMALLRQVLV
TGLLSKDIETYGVIKITKEGLDFIKKPVSFMMSEDHEYTEADDETIVTGGKSSGTADEVL
TGMLRELRKKVAKKLGVPPFVVFQDPSIEDMALKYPITIQELYNIHGVGEGKAKKYGSEF
VALISRYVEDNDIIRPDDLVVKSTGVNSANKLYIIQNIDRKLPLSDIASAKGLTMDALIK
EMEQIVYSGTKLNIKYWLDDILDDDQQEEIHDYFMESESDKIEDALKEFDGDYDIDELRL
MRIKFISEVAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaatgaaattgaaatacataaagaattaaagaagtatttcggctttagccaa
tttaaaggcttgcaggagcaagtcattacgagcattttagacggaaagaatacattcgta
attatgccgaccggtggaggaaagtctctttgctaccaattaccggctttaattcaagaa
ggaacagcaattgttgtttctccattaattgctttgatgaaaaatcaggttgatgcaatt
cgaagcctttcgtctgaaaatggaattgcacatgtattaaactcctctctaactaaaaca
gaaattgctcaggttaaaaaagatattacatctggattgaccaaacttttgtatgttgcc
cctgaatcattaacaaaagaagaatatgttgcttttttacaaagcgtgcctatttctttt
gtggccattgatgaggcgcactgtatctcagaatggggacacgattttaggccagagtat
agaaatctgcgaaatataattaagcagctgggtaaagtgccaattattggacttaccgca
accgcaacaccaaaggttcaggaagatattctgaaaaaccttgacatggccgatgccaat
acttttaaagcatcgttcaacagaccgaacttgtattatgaagttcgtaccaaaacaaaa
aatattgagtcggatattattcgatttatcaaacagcataaaggcaaatctgggattatt
tactgcttaagccgtaaaaaagtagaatcgattgccgaagttttacaagtaaacggaatc
agtgctgttccttatcatgcaggtttagatgccaaaacccgtgccaaacatcaagatatg
tttttgatggaagatgttgatgtcgttgtagcaacaatagctttcggaatgggaatcgat
aaaccagacgttcgttttgtaattcaccatgatattccgaaatctcttgaaagttattac
caagaaaccggtcgcgcaggacgtgacggtggagagggtcattgtctagcgtattactct
tataaagatgtagaaaagctagagaaatttatgtctggaaaaccagttgccgaacaagaa
attggttttgcacttttgcaagaagtggtggcatacgccgaaacttcaatgtcgcgtaga
aaattccttcttcattatttcggtgaagaatttgacagtgaaactggcgaaggagccgat
atggacgacaatgttcgcaacccgaaacataaagttgaagccaaagatcaagtagttaaa
ttgcttgaaattgttcgcgataccaaacatatttacaaatcaaaagaaattgtatttact
ttaattggccgtatcaatgcggttattaaagcgcataaaacagatacacagccttatttt
ggttctggttcagaccacgacgaaaaatactggatggcattgttgagacaagttttggta
acagggcttttgtcaaaagacattgagacttatggcgtaataaaaattacaaaggaaggt
ttagattttatcaaaaagccagtttcgtttatgatgtctgaagaccatgaatacactgaa
gccgatgatgaaacaattgttacaggaggaaaatcttctggaacagcagacgaagtttta
actggaatgcttcgcgaacttcgtaaaaaagtagctaaaaaactgggagttcctccattc
gtagttttccaagatccttcaatcgaagatatggctttaaaatatccgataacaattcag
gaattatataatattcatggtgttggtgaagggaaagctaaaaaatacggaagcgaattt
gtagctttaatcagccgatatgttgaggataatgatattattcgtccagacgatttagtt
gttaaatctacaggagtgaattctgctaacaaattatacatcattcagaatattgataga
aaacttccattaagtgatattgcttccgcgaaaggtttaacgatggatgctttgatcaaa
gaaatggaacagattgtttattctggaacaaaactgaacatcaaatattggttagatgat
attttggacgacgatcaacaggaagaaattcatgattatttcatggaatctgaatctgat
aaaatcgaagacgcactaaaagaatttgatggcgattacgatattgatgaattgcgttta
atgcgtataaagtttattagcgaagtagcgaattaa
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integrated database retrieval system
