Flavobacterium johnsoniae UW101: Fjoh_0706
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Entry
Fjoh_0706 CDS
T00508
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Fjoh_0706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fjo03400
]
Fjoh_0706
DNA repair and recombination proteins [BR:
fjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Fjoh_0706
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Fjoh_0706
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF5717
Motif
Other DBs
NCBI-ProteinID:
ABQ03741
UniProt:
A5FM31
LinkDB
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Position
complement(777914..778627)
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AA seq
237 aa
AA seq
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MQIKTKAIVISSLKFQEKSLIVKCFTLSNGLKSYFVRDAFSSRKASQKIAYFQPLSILEI
EAVHKNKGTLENFKEIKTAVPFQTIHTDIFKSTIVMFLSEMLHYSIQEEEKNEPLFVFLE
TALTWLDHHDDISNFHLILLLEITKYLGFYPDVSEIDLPYFEMKEGIFTLFHTSTALSEH
ETNLLKKLLDLKFDNSQKVFHVVERQILLRVLIDFYSAHLDGFKKPKSLDILKEIFS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaatcaaaaccaaagcaatagtaatctcatcattaaaatttcaggaaaaaagcctg
attgtaaaatgttttacgctttcaaacggactgaaatcttattttgtacgagatgcgttt
tcaagtcgaaaagcaagtcagaaaattgcgtattttcagccattatctattttagaaatc
gaagccgtccataaaaacaaagggactttggaaaacttcaaagaaataaaaacggcagtt
ccttttcaaaccattcatacagatatctttaaaagcacaatagtgatgtttttgtctgaa
atgcttcattattctattcaggaagaagaaaaaaacgaaccgctttttgtatttttagaa
actgctttaacctggctggatcaccatgacgatatttctaattttcatttgattttgctt
ctggaaatcacaaaatatcttggtttttatccagatgtttctgaaattgatttgccttat
tttgaaatgaaagaagggatttttacactctttcatacttcaacagcactttctgaacat
gaaaccaatttgcttaaaaaacttcttgatcttaaatttgacaacagtcaaaaagtcttt
catgttgttgaaaggcagatacttcttagggttttaattgatttttacagcgctcactta
gatgggtttaaaaaacctaagtcgctggatattttgaaagaaatcttttcttaa
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