Flavobacterium johnsoniae UW101: Fjoh_0828
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Entry
Fjoh_0828 CDS
T00508
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fjo
Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fjo03400
]
Fjoh_0828
DNA repair and recombination proteins [BR:
fjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Fjoh_0828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
DnaB_C
Zn_ribbon_LapB
AAA
Lon_C
DUF7125
AAA_22
AAA_5
AAA_24
TniB
CobU
AAA_14
Rad51
AAA_16
NTPase_1
ABC_tran
nSTAND_NTPase5
Isochorismatase
AAA_18
RsgA_GTPase
DZR
NACHT
Motif
Other DBs
NCBI-ProteinID:
ABQ03862
UniProt:
A5FLR3
LinkDB
All DBs
Position
938779..940140
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AA seq
453 aa
AA seq
DB search
MSKVKTSFFCQNCGTQYSKWQGQCNACKEWNTIAEEIIQKQEKVAWKSEPTSSSKAPRPL
KITEIDSAQEIRMDTTDGELNRVLGGGIVPGSLTLLGGEPGIGKSTLLLQISLKLPYKTL
YVSGEESQKQIKMRAERITPNSDNCYILTETKTQNIFKQIEAIQPEIVIIDSIQTLHTDY
IESTAGSISQIRETTAELIKFAKETNIPVILIGHITKDGNIAGPKILEHMVDTVLQFEGD
RNHIYRILRSLKNRFGSTSELGIYEMLGSGLREVSNPSEILISHKDEELSGTAIATTLEG
MRPLMIEIQSLVSTAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGAKDVFLNVTGGI
SVDDPAIDLAVVAAILSSNEDIPVGKGFCFAGEVGLSGEIRPVNRVDQRIQEAEKLGFDT
IFVSKYNKIALKNTGIKVELVAKIEDVASILFG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagttaaaacttcctttttttgccaaaattgcggcacccaatattctaaatgg
caggggcagtgcaacgcgtgcaaggaatggaatacaattgctgaagaaataatccagaaa
caagaaaaagtcgcctggaaaagcgagccgacttcatcaagtaaagcaccaagaccttta
aaaataactgaaattgattcggcgcaggaaattcgtatggatactaccgacggcgaattg
aatcgtgttttgggaggcggaattgttccgggatctttaacacttttaggcggcgaacca
ggaattggaaaaagtacacttttacttcaaatctcattaaaattaccttataaaacctta
tatgtttctggcgaagaaagccagaaacaaataaaaatgcgtgccgaaagaataacgcca
aacagcgataactgctatattttaacggaaaccaaaacgcaaaacatttttaaacaaatt
gaagccattcagcctgaaattgtaatcatcgattcgattcagactttacatacagattat
attgaatctactgccggcagtatttctcaaattagagaaaccactgccgaattgatcaaa
tttgctaaagaaaccaatattccggttattttaattggtcatattactaaagacggaaat
atcgccggaccaaaaattctggaacacatggttgacaccgttcttcagtttgaaggcgac
agaaaccatatttatcgaattctgcgttcgctgaaaaatcgctttggttcaacctctgaa
ctgggaatttacgaaatgcttggaagcggtttgcgagaagtcagcaatccgtcagaaata
ttaatttcacacaaagacgaagaattatcaggaactgcaattgccacaactcttgaggga
atgcgcccgctgatgatcgaaattcagtctttggtaagtaccgctgtttatggaactcct
caaagaagcacaacaggttacaatgccaaacgtctaaacatgattttggctgttttagaa
aaaagagccggattccgtttgggtgcaaaagacgttttcttaaatgtaaccggaggaatt
tctgtagatgatcctgcgattgatcttgcagttgttgctgcaattttatcatcaaatgaa
gatatacccgttggaaaaggtttttgttttgccggtgaagttggtctttctggagaaatt
cgtcctgtaaaccgtgtagaccagcgcattcaggaagccgaaaaattaggcttcgacacg
atctttgtttctaaatacaataaaattgctttaaaaaatacaggaatcaaagttgaactt
gtagcaaaaattgaagatgttgccagtatcctttttggttga
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