Flavobacterium johnsoniae UW101: Fjoh_0832
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Entry
Fjoh_0832 CDS
T00508
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Fjoh_0832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fjo03400
]
Fjoh_0832
Enzymes [BR:
fjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Fjoh_0832
DNA repair and recombination proteins [BR:
fjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Fjoh_0832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABQ03866
UniProt:
A5FLQ0
LinkDB
All DBs
Position
complement(944550..945311)
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AA seq
253 aa
AA seq
DB search
MKIISYNVNGIRAAITKGFIEWLQAASPDVICLQEIKATQDQIPVEAITAAGYPYQYYYP
ATKKGYSGVAILSKIEPQKVVYGTGIHHMDFEGRNLRADFDDVSVMSLYLPSGTNIDRLD
HKFMFMDDFQTYINELKISIPNLIICGDYNICHEAIDIHDPVRNKTVSGFLPEERAWLDA
FMKSGFIDSFRHFNKDPHHYSWWSYRAGARGNNKGWRIDYNLVSNAIEHRLKRAVILPDA
VHSDHCPVLVEIE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatttcttataatgtaaacggaattcgtgctgcaattaccaaaggatttata
gaatggctgcaagcggcgagtccggatgttatctgtcttcaggagattaaagcaactcag
gatcaaattcctgtagaggctataacggctgcaggctatccgtatcagtattattatccg
gcaaccaaaaaaggatacagcggcgttgcaatattatctaaaattgaaccccaaaaagta
gtttatggaacaggaattcatcatatggattttgaaggacgcaaccttcgtgccgatttt
gatgatgtatcagtaatgagtttgtatcttccatcgggaactaatatagacagactggat
cataaatttatgttcatggacgattttcaaacttatattaatgaattgaaaatttctatt
ccaaatttaataatatgtggagattataatatttgtcatgaagccatagatattcatgat
cctgttcgtaataaaacggtttcaggatttttgcctgaagaacgtgcctggcttgatgct
tttatgaaatctggatttatagacagtttccgtcattttaataaagatccgcatcattat
tcatggtggagttacagagccggagcaagaggaaataataaaggatggcgtattgattat
aacttggtaagcaacgctattgagcatagattaaaacgtgctgttatccttccggatgca
gttcattcagaccattgtccggttttagtcgagattgagtaa
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