Flavobacterium johnsoniae UW101: Fjoh_1021
Help
Entry
Fjoh_1021 CDS
T00508
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
fjo
Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Fjoh_1021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_central_region
HHH_9
Tex_N
S1
HHH_7
YqgF
T2SSK
HHH_6
PI3K_P85_iSH2
HHH
ATP-synt_ab_C
HHH_2
E3_binding
Spt6_S1
DUF7458
Motif
Other DBs
NCBI-ProteinID:
ABQ04054
UniProt:
A5FL63
LinkDB
All DBs
Position
1164226..1166349
Genome browser
AA seq
707 aa
AA seq
DB search
MTNIQFIAKSVQAPAVSIQNTVKLLEEDCTIPFISRYRKDATGNLDETVIEQIAKLQKDY
DTLIKRKEAVLKSIEEQKALTPELKKKIEESFDLQEIEDFYLPYKKKKKTKADVAREFGL
EPLAKLIISESDADIDFISTQYINENVINEEAAIQGARDIVAEWINENIYVRKQLRRLFQ
RKATITTKVVKKKAEEEGAQKFNQYFDWEEPLTKAPAHRLLAMLRAENEGFIKMKIDVDI
DDAYDVIDEIIIKKQNNSTAHLQLAIEDSYKRLLNPAIGNETLQEAKAKADANSIQVFAN
NLGQLLLAPPLGEKRILAIDPGFRSGCKVVCLDEKGDLLYNETIYPHAPQNEESMAIKKI
RSMVNAYQIDAISIGNGTASRETEFFIKKIAFDKPVQVFVVSEAGASVYSASKIAREEFP
NYDVTVRGSVSIGRRLSDPLAELVKIDPKAIGVGQYQHDVDQTKLKEELDSTVIRCVNSV
GININTASKHLLSYVSGIGEKLAENIVQYRSENGPFEDRKQLKKVPRLGDKAYQQGAAFI
RITNAKNPLDNSAVHPEAYPVVEKMAKDLNISLNDLIANKEKTALIKPEKYVTPEIGLLT
LKDIIKELEKPGLDPRKSAKVFEFDANVKSIKDLKTGMILPGIVNNITNFGCFVDIGIKE
SGLVHISQLKAGFVSDVNEVVKLHQHVDVKVTEVDEDRKRIQLTMIL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgactaatattcaattcattgccaagtctgttcaggcaccggcagtcagtattcaaaac
acagtaaaattactagaggaagattgtacgattccgtttatttcccgataccgaaaagac
gctaccggaaatcttgatgaaactgtaattgagcagattgcgaaacttcaaaaagattat
gatacgcttataaaacgtaaagaagccgttttaaaatcaattgaagagcaaaaagcactt
acgccagaattgaagaaaaaaattgaagaaagttttgatttacaagaaattgaagatttt
taccttccatataaaaagaagaaaaaaacaaaagccgatgtggcgcgcgaatttggtctt
gaacctttggcaaaactgattatatctgaaagtgacgctgatatcgattttatttcgaca
caatacattaatgaaaatgttattaacgaagaagccgctattcaaggcgcaagagatatt
gtagcagaatggattaacgaaaatatttacgttcgtaaacaattaagaagattgtttcaa
cgtaaagcgacaatcacaacaaaagtggttaaaaagaaagcagaggaagaaggcgcacaa
aaattcaaccaatattttgattgggaagagcctttaacaaaagcgccggcacaccgttta
ttagcaatgttacgtgcagaaaatgaaggttttattaaaatgaaaatcgatgttgatatc
gacgatgcctacgatgttattgacgaaattatcattaaaaagcaaaataattcaacagct
catttgcaattagcaattgaagatagttataaacgtttattgaatccggcaattggaaat
gaaaccctgcaggaagcaaaagcaaaagccgatgctaattctattcaggtttttgctaac
aatttaggacagttattattagcgccaccgttgggagaaaaacgtattttggcaattgac
ccaggatttagaagcggttgtaaagtggtttgtctggacgaaaaaggcgatttattatac
aacgaaacgatttatccacatgcgccgcaaaatgaggaatcgatggcgatcaagaaaatt
cgttcgatggtaaatgcatatcaaattgatgccatttctattgggaacggaacggcttct
cgcgaaactgaatttttcatcaaaaaaatcgcgttcgacaagccagttcaggtttttgtg
gtttctgaggcaggagcttcggtatattcagcttcaaaaattgcgagagaagaatttccg
aattatgatgtaacagttcgtggatcagtttctattggaagaagactttcagatccgttg
gccgaattggtaaaaattgacccaaaagcaattggagtaggacagtatcagcacgatgtt
gatcagacaaaactaaaagaagaattggacagtacagtaattcgctgcgtgaactcggtt
ggaattaacattaacacagcaagtaaacatttactaagctatgtgagtggaattggggag
aagctggccgaaaacattgtacaataccgttctgaaaacggaccttttgaagacagaaaa
cagcttaagaaagtaccgcgtttaggagataaagcttatcagcagggagcagcgtttatt
agaattacaaatgctaaaaatccgctggataattcggctgtacacccagaggcttatcca
gttgttgaaaagatggcaaaagatttgaatatttctttaaacgacttaattgctaataaa
gagaaaacagcccttattaagcctgaaaagtatgtaacacctgaaattggtttacttacg
ctgaaagacatcataaaagagcttgaaaagcctggattagacccaagaaagtctgctaag
gtttttgaatttgatgcaaatgtaaaatcaatcaaagatttgaaaacaggaatgattctt
ccgggaattgttaataacatcaccaactttggctgttttgttgacatcggaatcaaagaa
agcggattagtgcatatttcgcagttaaaagccggctttgtaagcgacgtaaacgaagtg
gttaaattgcatcaacatgttgatgttaaggttactgaagttgacgaagatagaaagaga
attcaattgacaatgattttataa
DBGET
integrated database retrieval system
