Flavobacterium johnsoniae UW101: Fjoh_1404
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Entry
Fjoh_1404 CDS
T00508
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
fjo
Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fjo03000
]
Fjoh_1404
Transcription factors [BR:
fjo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Fjoh_1404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_10
Sigma54_DBD
Sigma70_r4
Fe_dep_repress
HTH_23
HTH_11
HTH_24
HTH_3
HTH_38
HTH_7
HTH_5
Sigma70_r4_2
SpoIIID
GerE
TnsD
Motif
Other DBs
NCBI-ProteinID:
ABQ04436
UniProt:
A5FK30
LinkDB
All DBs
Position
complement(1603168..1604199)
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AA seq
343 aa
AA seq
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MKRKITLKQIAKELDVSISTVSKSLRNSLEIGEETRLKVQAFAKFYNYKPNNIALSLKNR
KTKSIGIIIPEIVHYFFSTVINGIEQVANEYGYSVVICVSDDSFDKEVLNMEMLANGSID
GFIMSLSKETQFKGDFHHITEVINQGMPVVMFDRVTNDILCDKVIIDDKSAAYEAVQSLI
DSGRKKIALVTTVDYVSVGKLRTDGYEKALLDNGLPFNEDLIIKIEDVDTCEITISQLLH
DRAFDAVFAVNELFAVTIIKTANKMGLKVPEDLAVIAFTDGIISKYSTPTITTVSQSGEK
MGNKAAKMLIERIEAEEDEDEEHTENYITEVIETHLIKRESTD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaaaataaccttaaaacaaatcgcaaaggaacttgacgtctctatctcaact
gtctcaaaatcactcagaaacagtcttgaaattggagaagaaacaagactaaaagttcag
gcttttgcaaagttttataactataaaccaaacaatattgcccttagtttaaaaaaccga
aaaaccaaaagtattggtattattattccggaaattgtacattattttttctctactgta
atcaacggaattgaacaggttgcgaacgaatatggttacagtgttgtcatttgtgtatcg
gacgattcttttgataaagaggtgctgaatatggagatgttagccaacggaagtattgat
ggttttatcatgtctctttctaaagaaacccagtttaaaggcgactttcaccatataaca
gaagttatcaatcagggaatgccggttgtaatgtttgaccgtgttacgaatgatatttta
tgtgataaagtaattattgatgataaatcggcagcgtatgaagccgttcagagtttaatt
gacagcggacgcaaaaaaattgcacttgtaacaactgttgattatgtaagtgttggaaaa
ctgcgaacagacggttacgaaaaagccttattagataacggattaccttttaatgaggat
ttaattataaaaatcgaagatgtagatacctgcgaaattaccataagccagcttttgcat
gatcgtgccttcgatgctgtttttgccgtaaacgagctttttgcagtaacgattattaaa
acagccaataaaatgggattaaaagttcctgaagatttagctgttattgcttttacagac
ggaattatttcaaaatattcaactccaactatcaccacagttagtcaaagcggtgaaaaa
atgggcaataaagcagccaaaatgcttattgaacgtatagaggcggaagaagatgaggat
gaagaacatactgaaaattacattacagaagtcatagaaacgcatctcataaaaagagaa
tctactgactaa
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