Flavobacterium johnsoniae UW101: Fjoh_1532
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Entry
Fjoh_1532 CDS
T00508
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fjo
Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fjo03019
]
Fjoh_1532
03009 Ribosome biogenesis [BR:
fjo03009
]
Fjoh_1532
Messenger RNA biogenesis [BR:
fjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Fjoh_1532
Ribosome biogenesis [BR:
fjo03009
]
Prokaryotic type
rRNA processing factors
Fjoh_1532
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF6305
Motif
Other DBs
NCBI-ProteinID:
ABQ04564
UniProt:
A5FJP9
LinkDB
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Position
complement(1771736..1773367)
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AA seq
543 aa
AA seq
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MIFVFWFLVSLPTTINKQPTTNSRIKIYSVNKELIIRSSSEAVDFALLKDGKLIELHKEE
EKSNFQVGDIFIAKIRKPVAGLNAAFVNVGFEKDAFLHYHDLGPNLASQLKFIKLVSAGK
LKDFSLKTFQFEKEIDKDGIITDILSANQSVLVQVVKEPISTKGPRISAELSLAGRFIVL
VPFSDRVSISQKIEDKKEKDRLKKLVLSIKPKGFGVIVRTVAEGKNVAELEKDLQNLLGR
WSAMCKKLPTAHHPSKVLGELNRASSILRDVFNDTFSGIQIDDEELYHQTKEYLQEIAPS
KQSIVKFYQSNDTPIFEKYNIERQIKTSFGRTVSMSKGAYLIIEHTEALHVIDVNSGNRS
NKATNQEDTAMEVNMIAAAEIARQLRLRDMGGIIVVDFIDMSNPENRKVLFDFLREEMSD
DKAKHKILPPSKFGLVQITRQRVRPEVNIKTREEDPNKVNGEIEAPILIIDKITSDLERL
LKTHNKVVLNTHPFVAAYLSKGFPSLRSKWFFEHKKWVKIIPRDAYTYLEYHFYDKKGNV
ITE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgttttttggtttttggtttctttaccaacaactatcaacaagcaaccgaca
accaattcacggataaaaatttacagtgtgaataaagaattaatcattagatctagttct
gaagcagtagattttgccttattaaaagatggaaaactaattgaattacacaaagaagaa
gaaaaaagcaactttcaggttggtgatatttttattgccaaaatcagaaaaccagttgcc
ggacttaatgctgcttttgtaaatgtaggtttcgaaaaagatgcctttttacattatcat
gatttaggtccaaatctagcttctcagctgaaattcataaaacttgtaagcgcaggtaaa
ttaaaagatttctccctaaaaacctttcagtttgaaaaagagattgacaaagatggcatc
attactgatattttaagtgccaatcaatctgtcttagttcaagtagttaaagaacctata
tcgaccaaaggtccaagaataagtgctgagctttctcttgccggaagatttatcgttcta
gttcctttttctgatcgagtttctatttctcaaaaaatagaagacaaaaaagaaaaggat
cgtctaaaaaaacttgttctatcgatcaaacctaaaggatttggtgttattgttcgtaca
gtagccgaaggcaaaaacgtagccgaattagaaaaagatttgcagaacctgcttggcaga
tggtctgcaatgtgtaaaaaattaccaactgctcatcatccatcaaaagtattaggagag
cttaacagagcttcttcaatattaagagatgtattcaacgataccttcagcggtattcaa
atagatgatgaagagttgtaccatcaaacgaaggaatatctgcaggaaattgcaccttca
aaacaatcgattgttaagttttatcaatcaaatgacactccaatttttgagaaatacaat
atagagagacaaatcaaaacttcttttggccgaactgtctccatgagtaaaggtgcttat
cttatcatagaacacactgaggctcttcacgttatagatgtgaacagcggaaaccgttct
aacaaagcaaccaatcaggaagatactgccatggaagtaaatatgattgccgcagcagaa
atcgcaagacaactacgcttgcgtgatatgggcggtataatcgtagttgattttatcgat
atgtctaatccagaaaacaggaaagttttgttcgacttcttgcgagaagaaatgagcgac
gataaagcaaagcataaaatattaccgccgagtaagtttggtttggtccagattacaaga
cagcgagtaagaccagaagttaatataaaaacaagagaagaagatccaaataaagttaat
ggtgaaattgaagcgccaatattaataattgacaagatcacctctgacttagaaagactt
ttaaaaacccataataaggttgtgcttaatacacacccatttgtggctgcatacctcagc
aaaggttttccatcattacgttcaaaatggttttttgaacataagaaatgggtgaaaatc
atacctcgtgacgcttacacgtatttagaataccatttctacgacaaaaaaggaaatgtt
attacagaataa
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