Flavobacterium johnsoniae UW101: Fjoh_1617
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Entry
Fjoh_1617 CDS
T00508
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo03030
DNA replication
fjo03410
Base excision repair
fjo03420
Nucleotide excision repair
fjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Fjoh_1617
03410 Base excision repair
Fjoh_1617
03420 Nucleotide excision repair
Fjoh_1617
03440 Homologous recombination
Fjoh_1617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fjo03032
]
Fjoh_1617
03400 DNA repair and recombination proteins [BR:
fjo03400
]
Fjoh_1617
Enzymes [BR:
fjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Fjoh_1617
DNA replication proteins [BR:
fjo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Fjoh_1617
DNA repair and recombination proteins [BR:
fjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Fjoh_1617
NER (nucleotide excision repair)
GGR (global genome repair) factors
Fjoh_1617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABQ04649
UniProt:
A5FJH6
LinkDB
All DBs
Position
complement(1865596..1868445)
Genome browser
AA seq
949 aa
AA seq
DB search
MSTQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFMNSLLDVIKREKPDHLAV
AFDKEGSRARTEMFAEYKANRDETPEAIKIAVPYIQELLKAMHIPIIELAGCEADDLIGT
IAKQAEKQNYKVYMVTPDKDFAQLVSENIFMYKPARMGNGIEIWGVPEVLAKFEVERPEQ
VIDFLGMMGDAVDNIPGLPGVGEVTAKKFLKEFGSMENLLANTDKLKGKMKENIEANKDK
GILSKKLAAIMCDCDVVFNEDDYELSRPDIEKTDAIFQELEFRRMAEQFDNLFKVGAGSE
SGSTPAQDAKLYKKPQPKNEDQFDLFGGGGTTLDENAEAARNSFYNTLENTEHSYQTVQG
DLGIKLLLQNLQKQTSVCFDTETTGIDALHAELVGMSFSYEKGKAFYVPFPESQEEAKVL
IDKFVPFFENENIEKIGQNLKYDLKILSNYGVTVKGKLFDTMIAHYLINPDMRHNMDILA
ETYLKYSPKSIETLIGKKGKNQLSMRDVPLEDIKEYAAEDADVTLQLKEIFTAELEKTET
KKLFDEIEIPLVSVLADMETEGIRLDVEFLKQMSKEMDVEIKSLEEQIYETAGEKFNLAS
PKQLGDILFDKLKIGGAKQKKTKTGQYATGEEVLTYLANDNPIVKQILDWRQMVKLQSTY
ILALPEQVDKKTLRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFVARDENY
TLISADYSQIELRIIAALSGEENMIAAFQNGEDIHRATAAKVFDVALEEVSREQRSNAKT
VNFGIIYGVSAFGLSNQTSLSRSESAALIDAYYKTYPRLKSYISEQVDFAREKGYVQTIL
GRRRYLKDINSANAVVRSAAERNAVNAPIQGSAADVIKIAMINIHKKLREENWKSKMLLQ
VHDELVFDVHNDELEKIQPMIKHEMENAFKMSVPLEVELGLGKDWLEAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcaaaaacgcctttttcttctagatgcttatgcattaatttttcgcggttat
tatgcctttataaaaaacccgagaatcaactcaaaaggaatggatacatctgcaattatg
ggttttatgaactcacttttagatgttattaaaagagaaaaaccagatcatttagccgtt
gcttttgataaagaaggaagccgcgctagaacagaaatgtttgccgaatataaagctaac
cgcgacgaaactcccgaagctattaaaattgctgttccttatattcaggaattattaaaa
gcaatgcacattcctattattgaacttgcaggctgtgaagctgatgatttaattggtaca
attgccaaacaagccgagaaacaaaactacaaggtatacatggtaacacctgataaggat
tttgcgcagttggtttctgaaaatatatttatgtacaaacctgcccgaatgggtaatgga
atcgaaatttggggagttccagaggttttagcaaagtttgaagtcgagagaccagaacag
gttatcgattttcttggaatgatgggtgacgccgtagataatattccgggattacctgga
gttggtgaagtaacggctaaaaaattcttgaaagaatttggttcaatggaaaatcttttg
gctaatactgataaactgaaaggcaaaatgaaagaaaacatcgaagccaataaagacaaa
ggtattttatctaaaaaactggcggctattatgtgtgactgcgatgtcgtttttaatgaa
gatgattacgaactttctcgtccggatattgaaaaaaccgatgctatttttcaggaactg
gaatttagaagaatggcagaacaatttgataatttgtttaaagttggcgcaggaagtgaa
tcaggatcaactccggctcaggatgctaaattatacaaaaaaccacagccaaagaatgaa
gaccaatttgatctttttggcggaggcggcaccactcttgatgaaaatgccgaagctgca
agaaattcattttataatactttagaaaatactgaacattcttatcagaccgttcagggc
gatttaggaattaaattgcttttacaaaatttacaaaaacaaacttcggtttgttttgat
accgaaaccacaggaattgatgctttgcatgcagaacttgtaggaatgtctttttcttac
gaaaaaggaaaagcattttatgttccgtttccggaaagtcaggaagaagcaaaagttttg
attgacaagtttgttccattttttgaaaatgaaaacattgagaaaattggtcaaaattta
aaatacgatttaaaaatcctttctaattacggtgttactgtaaaaggaaaactttttgac
acgatgatcgcacactatctaattaatccggatatgcgtcataatatggatattttagcc
gaaacgtatttgaaatattctccaaaatctattgaaactttaattggtaaaaaaggaaaa
aatcagctttctatgcgcgatgttcctttagaagatattaaagaatacgccgcagaagat
gccgatgtaactttacaattaaaagaaatctttacagccgaattagaaaaaaccgagacc
aaaaagctgtttgacgaaattgaaattccattagtaagcgttttagccgacatggaaaca
gaaggaattcgtctggatgttgagttcttaaaacaaatgtctaaagagatggacgttgaa
atcaaatctttagaagaacagatatacgaaactgccggcgagaaattcaatctggcttct
ccaaaacaattaggagacattttatttgataaacttaaaattggcggcgcaaaacaaaag
aaaaccaaaacaggtcaatatgcaaccggagaagaagttttgacttatttagccaacgat
aatccaatcgtaaaacaaattcttgattggcgtcaaatggtaaaactgcaaagcacttat
attttagctttaccagaacaggttgacaaaaagactttacgtgttcatactgattatatg
cagacggttgccgcaacaggacgtttaagttctaataatccaaacttgcaaaacattcca
attcgtaccgaaagaggacgtcagattcgtaaagcttttgtagcgcgcgatgaaaattat
actttaatttctgccgattactctcaaattgaattgcgaattattgcagccttaagcggt
gaagaaaatatgatcgctgctttccaaaatggagaagatattcaccgagctactgctgca
aaagtttttgatgtagctttagaagaagtttcacgcgagcaaagaagtaatgctaaaacc
gtaaactttggaattatctatggagtttctgcttttggattaagtaatcagacttcactt
tcaagaagcgaaagcgctgctttgatcgatgcttattacaaaacatatccgcgtcttaaa
tcttatatctcagaacaagttgattttgctcgtgaaaaaggctacgtacaaaccatttta
ggccgccgtcgttacttaaaagatattaattctgcgaatgctgtcgtaagaagcgctgcc
gaaagaaatgctgtaaatgctccaattcagggaagtgctgctgatgtaattaaaattgcg
atgatcaacattcacaaaaaacttcgcgaagaaaattggaaatctaaaatgttgcttcag
gttcatgatgagcttgtgttcgatgttcacaatgatgaactcgaaaaaatccagccaatg
attaaacacgaaatggaaaatgcatttaaaatgtctgttcctttagaagttgaacttgga
ttaggtaaagactggttagaagcccactaa
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