Flavobacterium johnsoniae UW101: Fjoh_1919
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Entry
Fjoh_1919 CDS
T00508
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Fjoh_1919 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fjo01007
]
Fjoh_1919 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fjo03016
]
Fjoh_1919 (lysS)
Enzymes [BR:
fjo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Fjoh_1919 (lysS)
Amino acid related enzymes [BR:
fjo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Fjoh_1919 (lysS)
Transfer RNA biogenesis [BR:
fjo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Fjoh_1919 (lysS)
Prokaryotic type
Other AARSs
Fjoh_1919 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ABQ04951
UniProt:
A5FIL3
LinkDB
All DBs
Position
complement(2217648..2219351)
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AA seq
567 aa
AA seq
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MALSEQEIIRREKLQNLRNLGINPYPANLFPVNHTSKQIKETFEEGKKVIVAGRLMSVRD
QGKACFAELQDSEGRIQLYVNRDVLCEGDDKTLYNQVFKKLTDLGDFIGIEGELFTTQVG
AKCIRVTGFTFLSKTLRPLPLPKVDEDGNVHDAFNDAELRYRMRYVDLTVNPQVKETFIK
RTKLFTAMRGYFNDAGYLEVDTPVLQSIPGGASARPFITHHNSLDIPLYMRIANELYLKR
LIVGGFEGVYEFSRNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMEFAEGLLEHCAIAVN
GTSEVTFGEHKINFKAPYARVTMTDSIKHFTGFDISGKTEQELFEAARGMGIEVDETMGK
GKLIDEIFGAKCEGNYIQPTFITDYPKEMSPLCKEHRDNPDLTERFELMVCGKEIANAYS
ELNDPIDQRERFEDQMRLSEKGDDEANGIIDEDFLRALEYGMPPTSGMGIGMDRLIMYLT
NNASIQEVLLFPQMRPEKKQAQIELSDEEKFIIDLLTKNENRMDLTQLKITANLSGKKWD
ASMKNLSKHGLTKVVVDGEFKFVELVG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcattatcagaacaagaaatcatcagaagagaaaaacttcaaaacttacgcaatctg
ggaatcaatccttatccagctaatctttttcctgtaaatcatacttcgaagcagataaag
gaaacttttgaggaaggtaagaaggttatcgttgcgggacgtttgatgagtgttcgtgat
cagggtaaagcttgttttgctgaattacaagacagcgaaggacgtattcaattgtacgta
aaccgtgatgttttatgcgaaggcgatgataaaactttatacaaccaagtattcaaaaaa
ttaaccgatttaggagattttattggtattgaaggtgaattgtttactacacaagttgga
gcaaaatgtattcgtgtaaccggctttactttcttaagcaaaacattacgtccgttacct
ttaccaaaagttgacgaagacggaaatgtacacgatgctttcaacgatgctgaattgcgt
tatagaatgcgttatgtagatttaactgtaaatccgcaggtaaaagaaacgtttattaaa
cgtacaaagttatttactgcaatgcgtggttattttaacgatgctggatatcttgaagtt
gatactccggttttacagtcaattcctggtggagcttcggcaagaccatttattacgcac
cataactcacttgatattccgctttacatgcgtattgcgaatgagttgtatttaaaaaga
ttaattgttggtggattcgaaggtgtttatgagttctctagaaacttccgtaacgaaggt
atggacagaacgcataatcctgagtttactgcaatggaaatatatgtagcttataaagac
tacaactggatgatggaatttgctgaaggtttactagagcattgtgcaattgctgttaac
ggaactagcgaagttacttttggcgagcacaaaatcaactttaaagcgccttatgcacgt
gttacaatgacagactctatcaagcattttactggtttcgacatttctggaaaaacagaa
caagaattgtttgaagcggctagaggaatgggaatcgaggttgacgaaacaatgggtaaa
ggaaaattaattgatgagatttttggagctaaatgtgaaggaaattatattcagccaact
ttcattacagattatccaaaagaaatgtctccgctttgtaaagaacacagagataatcca
gatttgactgagcgttttgaattaatggtttgcggtaaagaaattgcaaatgcatattct
gaattaaatgacccaatcgatcaaagagagcgttttgaagaccaaatgcgtctttctgaa
aaaggtgatgacgaagcaaacggaattatcgacgaagatttcttaagagcacttgagtac
ggtatgcctccaacatctggaatgggaattggaatggatcgtttaattatgtatttaaca
aacaatgcttctattcaggaagttttattgttccctcaaatgcgtcctgagaaaaaacaa
gctcagattgaactttctgatgaagaaaaatttatcattgacctgcttacgaaaaatgaa
aatagaatggatttaacgcagctaaaaattacagctaacttaagcggtaaaaaatgggat
gcgtctatgaaaaacttatctaaacacggtttaactaaagttgttgttgacggagagttt
aaatttgtggaactagttggttaa
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