Flavobacterium johnsoniae UW101: Fjoh_2500
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Entry
Fjoh_2500 CDS
T00508
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fjo
Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fjo03009
]
Fjoh_2500
Enzymes [BR:
fjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Fjoh_2500
Ribosome biogenesis [BR:
fjo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Fjoh_2500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
Methyltransf_25
MTS
TRAM
Methyltransf_15
PrmA
PCMT
TRM5-TYW2_MTfase
Alginate_lyase2
FtsJ
PabTrmU54_TRAM_dom
N6_N4_Mtase
Methyltransf_11
UPF0020
Methyltransf_ANTKMT
Motif
Other DBs
NCBI-ProteinID:
ABQ05527
UniProt:
A5FGZ1
LinkDB
All DBs
Position
complement(2986848..2988260)
Genome browser
AA seq
470 aa
AA seq
DB search
MGRKNTDKVVFHQIQVLDAGAKGVSVAKAPDGKVIFIPNVVPGDVVDVQTFKKRKAYYEG
KAVKFHELSEHRVDPICEHFGVCGGCKWQNMKYSQQLYYKQNEVKNHLQRIGKVELPEFE
TILGSEKQFFYRNKMEFSFSNSRWLTEKEIGSTEDLGNRNALGFHIPKMWDKILDIEKCH
LQEDPSNAIRNEIRAFANEHNLAFFNPREHSGLLRTLMIRTASTGEIMVLIQFFEDDKAN
RELVLDHLYEKFPQITSLQYVVNAKQNDTIYDQDIKLYKGRNYILEEMEGLKFSINAKSF
YQTNSDQAYELYKITRDYAGLTGEETVYDLYTGTGTIAQFVSKKAKKVIGVESVPEAILD
AKANAERNNITNCEFFVGDMKVVFNEAFIAQHGKPDVIITDPPRDGMHAAVIDQILKIAP
KKVVYVSCNSATQARDLALMDEKYKVTRVRPVDMFPQTHHVENVVLLELR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaaaatacagacaaagttgtctttcatcaaattcaggttcttgatgccgga
gccaagggagtatcagtagcaaaagctcctgacggaaaagttatctttattccaaatgtc
gttcctggagatgttgttgatgtacaaacattcaaaaaaagaaaagcatattacgaagga
aaagccgtaaaatttcacgaattatcagaacatcgtgtagatcctatctgcgaacatttt
ggtgtttgcggcggatgcaaatggcagaatatgaaatacagccagcagctgtattacaaa
caaaacgaagtaaaaaatcatttacagcgtattggaaaagttgaattgccggaatttgaa
actattttgggttcggaaaaacagtttttttacagaaataaaatggaattttcgttttct
aacagccgttggttaaccgaaaaagaaataggaagcactgaagatttaggaaacagaaat
gcattaggatttcatattccaaaaatgtgggataagattctggacatcgaaaaatgtcat
ttacaggaagatccgtcaaatgctattagaaacgaaattagagcttttgccaacgagcat
aatttagctttttttaatccaagagaacattccggacttttaagaactttaatgatacgt
acggcttcaaccggagaaatcatggttttgatccagttttttgaagatgataaagcaaac
cgcgaattggttttagatcatttatacgagaaatttccgcagattacttcattacaatat
gtggtaaatgccaaacaaaacgatactatttacgatcaggatataaaactttacaaagga
agaaattatatcttagaagaaatggaaggcttaaaattcagcattaatgctaaatctttt
taccaaaccaactctgatcaggcttacgaattatacaaaattacacgtgattatgcagga
ctaacaggagaagaaactgtttatgacttgtatacaggaacaggaactattgcacagttc
gtttctaaaaaagcaaaaaaagtaattggtgtagaaagtgttcctgaggcaattttagac
gctaaagcaaatgcagaacgcaataatattaccaattgtgagttttttgttggagacatg
aaagtcgtattcaacgaagcttttattgcacagcacggaaaaccagatgttattattaca
gatcctccaagagacggaatgcacgctgcggttatcgatcagattttaaaaattgcgcct
aaaaaagtagtttatgtaagctgtaattctgcaacacaagcacgtgatttagctttaatg
gacgaaaaatacaaagtaacacgtgtacgtccggttgatatgttccctcaaacgcatcat
gttgaaaatgttgtacttttagaacttcgataa
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