Flavobacterium johnsoniae UW101: Fjoh_2566
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Entry
Fjoh_2566 CDS
T00508
Name
(GenBank) Candidate pectin or pectate lyase; Polysaccharide lyase family 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo00040
Pentose and glucuronate interconversions
fjo01100
Metabolic pathways
fjo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Fjoh_2566
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Fjoh_2566
Enzymes [BR:
fjo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Fjoh_2566
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
ABQ05593
UniProt:
A5FGT3
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Position
complement(3052291..3053397)
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AA seq
368 aa
AA seq
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MNLKLKLSMFLLTLTFGFTACNSEEIASNTEAKTEAVTETPSGNLTAKIGNCAEVPGWAS
QNGGTTGGGSAAETTVTTYAQLKSAIENSSVKVIKISGTITVTTRLSFQDQTGKTIYGAN
GAKLVSTNQTKDASGIINIKRCKNIIIRNLIFEGPGAYDTDGWDNAILDECTNVWVDHCE
FRDGVDGNFDIKNKSDYISVTYSKFHYLKPPKAGGSGGSDDHRYSNLIGSSDGATGDRGK
LRITFARCWWAPGCKERMPRVRFGKVHIVNSFFNSTVSNKCIAAGFEADIRVESNVFEGV
KTPIDLMTGYTAVTATDNVFTSVSGNQAGSGTAFTPPYSIVKLNKTAVKADISANAGATL
GGNICGSF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaaattaaaactttcaatgtttttactaacattgactttcggatttacagca
tgtaactctgaagaaattgcttcgaacacagaagcaaaaactgaagcagtaaccgaaact
ccttcaggcaatttaactgctaaaattggaaactgtgccgaagttccgggctgggcttct
caaaacggcggaacaaccggcggaggttctgctgctgaaactacggttactacttatgct
cagctgaaatcggctattgaaaacagctctgtaaaagttattaaaatttcaggaactatt
acagttacgaccagattgtcatttcaggatcaaaccggtaaaactatttatggtgcaaac
ggtgcaaagttggtttcgactaatcagacaaaagatgcttctggaatcatcaacatcaaa
agatgtaaaaacattatcattagaaacctaatttttgaaggcccgggtgcttatgatact
gacggatgggacaatgcaattttggacgaatgtacaaatgtatgggttgaccactgcgaa
tttagagatggtgttgatggaaacttcgacattaaaaacaaatctgattatatttcggtt
acgtattctaaattccattatttaaaaccgccaaaagctggaggttctggaggatctgat
gatcacagatattcaaacttaattggttcaagcgacggtgcaacaggcgaccgcggaaaa
ttgagaatcacttttgcaagatgctggtgggctcctggatgtaaagaaagaatgccgaga
gttcgttttgggaaagtacatatcgtaaacagtttctttaacagtacggtaagcaacaaa
tgcatcgctgcaggttttgaagctgatattcgcgtagaaagcaatgtttttgaaggtgta
aaaacaccaatcgatttaatgacaggttatactgcagttacagcaaccgacaacgtattt
acaagtgtatcaggaaatcaggctggaagcggtacagcttttacaccgccttattctatt
gtaaagcttaataaaacagctgtaaaagccgatatttctgctaacgcaggagcaactttg
ggcggtaacatttgcggctctttctaa
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