Flavobacterium johnsoniae UW101: Fjoh_2707
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Entry
Fjoh_2707 CDS
T00508
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
fjo
Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fjo03016
]
Fjoh_2707 (trmE)
Transfer RNA biogenesis [BR:
fjo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Fjoh_2707 (trmE)
Prokaryotic type
Methyltransferases
Fjoh_2707 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Ras
Roc
MMR_HSR1_Xtn
GTP_EFTU
Dynamin_N
Arf
ATP_bind_1
AAA_22
ABC_tran
cobW
ABC_ATPase
AAA_29
DUF6960
Ribosomal_L14
Motif
Other DBs
NCBI-ProteinID:
ABQ05729
UniProt:
A5FGE0
LinkDB
All DBs
Position
complement(3220036..3221436)
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AA seq
466 aa
AA seq
DB search
MINQDSIVALATPSGAGAIAVIRISGAEAVSIGNSVFKSIKNKDLTKQKTHTLHLGHIVD
NGKTLDEVLVSVFKGPNSYTGEDTIEISCHGSTYIQQQIIQLLLRKGCRMADAGEFTLRA
FLNGKLDLSQAEAVADLISSDNEASHHIAMQQMRGGFSNEIAKLREELLNFASLIELELD
FAEEDVEFADRTQFHELLNRIEFVLKRLIDSFAVGNVIKNGIPVAIVGEPNVGKSTLLNA
LLNEERAIVSDIAGTTRDTIEDELVIGGIGFRFIDTAGIRETKDVVESIGIKKTFEKIDQ
AQVVIYLFDGLKFKASSSEFVSEIEQIKNKYPLKPLLIVVNKKDILSEDEVLNITQKLEN
LNAKLLLISAKQKIGVEELKNELLSFVNTGALRNNETIVTNTRHYDSLLKALDEIQKVKF
GLETNLSSDLIALDIKEALYQFGLITGQVSNDELLGNIFANFCIGK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgataaatcaagattctatagttgcattagctactccatcaggagccggagctattgct
gttattcgtatttcgggcgctgaagctgtttcaataggaaattctgtttttaaatctatc
aaaaacaaagacttaacgaaacaaaaaacgcatactttgcatttgggccatattgttgac
aacggaaaaacacttgatgaagttttggtttctgtttttaaaggccctaattcgtatact
ggagaagatacaatagaaatttcatgccacggatctacatatattcagcagcagattatt
caattattattgagaaaaggctgcagaatggccgatgccggtgaatttactttaagagct
ttcttaaatgggaagttagatttatctcaggcagaagctgttgcagatttaatttcatct
gataatgaagcttcacaccacattgccatgcagcaaatgcgaggtggtttcagcaatgaa
attgccaaattgcgagaagagcttttaaattttgcttctttgattgaacttgaattggac
tttgcagaggaagatgtggaatttgccgacagaactcagtttcatgaattattaaacaga
attgaatttgttttaaaacgtctaatagattcatttgcagttggaaatgttattaaaaac
ggaatcccggttgccattgttggtgagccgaatgttggtaaatcgactttattaaatgct
ttattaaatgaagagcgagcgattgtttctgacattgccggaacaacgcgcgatacaatt
gaagatgagctggttattggaggtattggttttagatttattgatacagccggaatacgc
gaaacgaaagatgttgtagaaagtattggaatcaagaaaactttcgaaaaaatagatcag
gcacaagttgttatttatttgtttgatggtttaaaatttaaagcatcgagttctgaattt
gtttcggaaattgaacaaattaaaaacaaatatcctttaaaaccgcttcttatagtggtc
aataaaaaggatattttatctgaagatgaagttttaaatattacacaaaagctcgaaaac
ttaaacgcgaaacttctattaatttcggcaaaacaaaaaattggagttgaagaattaaag
aacgaattattatcatttgttaatactggagcattacgaaataatgaaacaattgttaca
aatacaagacattatgactctttactgaaagctttagatgaaatacaaaaagtaaaattt
ggtcttgaaaccaatctttcaagtgacttaattgcacttgatattaaagaagccttatat
caattcggacttatcacaggtcaggtttccaacgacgaattactagggaatatctttgca
aatttctgtattggcaagtaa
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