Flavobacterium johnsoniae UW101: Fjoh_2858
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Entry
Fjoh_2858 CDS
T00508
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo03030
DNA replication
fjo03430
Mismatch repair
fjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Fjoh_2858
03430 Mismatch repair
Fjoh_2858
03440 Homologous recombination
Fjoh_2858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fjo03032
]
Fjoh_2858
03400 DNA repair and recombination proteins [BR:
fjo03400
]
Fjoh_2858
Enzymes [BR:
fjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Fjoh_2858
DNA replication proteins [BR:
fjo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Fjoh_2858
DNA repair and recombination proteins [BR:
fjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Fjoh_2858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABQ05879
UniProt:
A5FFY1
LinkDB
All DBs
Position
3389998..3390594
Genome browser
AA seq
198 aa
AA seq
DB search
MLDWIKNINKDYPEFWKEYLTKLEAKPSKFVVLSTETSGLNPNKDVILSLGAFSVIDDSI
IIKENFEAVLLQYKFLEDNGLSNEFIIESKMTKMPEAEALEAFINFLGNAVLVGHHINFD
IEMLNAALERLDCGRLKNEALDIDVMYRKLTDINDKQFSLNDLCEIYKIPKSDRNSSAED
AYKIGLLFLKLKSRLGIK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgctagactggattaaaaacattaacaaggattatccggaattctggaaagaatacttg
acaaaattagaagcaaaacccagcaaatttgtggttttgtctactgaaacttctggctta
aatcctaacaaagatgttattttgtctcttggcgctttttcagtcatagatgacagcatt
ataattaaggagaattttgaagccgttttactgcagtacaaattcttagaagacaatggt
ctttctaacgaatttattattgagagtaaaatgacaaaaatgcccgaagctgaggcctta
gaagcttttattaacttcttgggaaatgctgttttggttggtcatcatattaattttgat
attgaaatgcttaatgctgctttagaaagattggattgcggcaggttaaaaaatgaagcg
cttgatattgacgttatgtacagaaaattaactgacattaacgacaaacagttttcttta
aacgatttatgcgaaatttacaaaattccaaaaagtgacagaaattcttctgccgaagat
gcttataaaattggtcttctgttcttaaaactaaaatcgcgtttgggaattaaataa
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