Flavobacterium johnsoniae UW101: Fjoh_2912
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Entry
Fjoh_2912 CDS
T00508
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Fjoh_2912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fjo03400
]
Fjoh_2912
Enzymes [BR:
fjo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Fjoh_2912
DNA repair and recombination proteins [BR:
fjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Fjoh_2912
Prokaryotic type
Fjoh_2912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABQ05933
UniProt:
A5FFT1
LinkDB
All DBs
Position
complement(3454130..3454795)
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AA seq
221 aa
AA seq
DB search
MDVKMHSSWKPILNEEFQKPYFSELISFVKSEYTTKVCYPKGNQIFSAFDHCHFDEVKVV
IIGQDPYHGPNQANGLCFSVNDGIPFPPSLHNIFKEIETDLGKPMPSTGNLERWADQGVF
LLNATLTVRQSEAGSHQGKGWEKFTDAVIKQISAEKENVVFLLWGGFAQKKAALIDSSKH
HILKSGHPSPLSANRGFWFGNKHFSQTNDFLKSKGLKQIEW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaaaatgcattcttcttggaaaccaattctaaatgaagaatttcaaaaacca
tatttcagcgaattaatttcttttgtaaaatcagaatataccactaaggtttgttatcca
aagggaaatcagattttttctgcttttgatcattgtcattttgatgaagtaaaagtggtt
atcattgggcaggatccttatcacggaccaaatcaggcaaatggtttatgtttttctgta
aatgacggaattccttttcctccttctttgcataatatttttaaagaaatcgaaactgat
ttgggtaaaccaatgccgtcaaccggtaatcttgagcgctgggcagatcagggtgtattt
cttttaaatgcaactttaacggttaggcagtctgaagcaggaagtcaccagggaaaaggc
tgggaaaaatttacagatgctgttattaaacaaatttctgccgaaaaagaaaatgttgtt
tttcttctatggggtggatttgctcaaaagaaagctgctttgattgattcatcaaaacat
catattttaaaatccggacatccttcgcctttaagtgcaaacagaggtttttggtttgga
aacaaacatttcagccagacaaatgatttcttgaaatcaaaaggattaaaacaaattgaa
tggtaa
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