Flavobacterium johnsoniae UW101: Fjoh_2913
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Entry
Fjoh_2913 CDS
T00508
Name
(GenBank) DNA mismatch repair protein MutS domain protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Fjoh_2913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fjo03400
]
Fjoh_2913
DNA repair and recombination proteins [BR:
fjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Fjoh_2913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABQ05934
UniProt:
A5FFT2
LinkDB
All DBs
Position
3454929..3457094
Genome browser
AA seq
721 aa
AA seq
DB search
MISITEKTLQDLQFPTVLETISDGCNTDIGKEKALQIKPFRNKEELIQSLMQTSEYVSSF
QNNNAIPNHGFDAITHEIKFLAIQDSFLEVGSFRKIANLGATTNVLLNFLKKFDDYYPNL
NVRASRVELTKDIITAIDAIVDKYGEIKDNASPALAGIRQNMNLVRGKVNQSFGLALTQY
NGLGYLDDIKESFVQNRRVLAVLAMYRRKVKGSILGSSKTGSIAYIEPEATLKYSRELAN
LEYEEKEEITRILKNLSNVIRPYLPLLIEYQEFLSDIDVVAGKAKYANRINGILPAITEE
RRLFFREAYHPILYLNNKQKKEVTHPQTIELKQENRIIVISGPNAGGKTISLKTVGLLQL
MLQSGILIPVHERSETFLFDRILTDIGDNQSIENHLSTYSYRLKNMNYFLKKCNNKTMFL
IDEFGTGSDPELGGALAEIFLEEFYHREAFGIITTHYSNLKILANELPYATNANMMFDEK
SLEPMYKLALGQAGSSFTFEVAQKNGIPFGLINRAKKKIEVGKVRFDKTIATLQKERSKL
EKTSLNLKEEETRAREESKKMENINTKIQQKLESYQELYDSNQKIIYIGQKIDDIAEKYF
NNKNKKELIGEFLKIVEIENSKRKKATPKEAKAKVEKQKEIIAEVQVKVEEIRKEKKEKK
LKPVIEKPKPILKVGDRVRMLDGRSVGSIDIIEKNKATVNYGLFTSKVSLDELELVEAVK
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgattagtattaccgaaaaaacattacaagacttacaatttccaaccgtacttgaaacc
atttcagatggatgcaataccgatattggaaaagaaaaagctttacaaataaaaccattt
agaaataaagaagaattaatacagtcgctgatgcagacttcagaatatgtttcttctttt
caaaataataacgcaattccaaatcacggatttgatgccataactcatgaaattaaattt
ctggctattcaagacagctttcttgaagtaggaagttttagaaaaattgcaaatcttggt
gcaacaacaaatgtcttattaaatttcctgaaaaagtttgatgattattatccaaactta
aatgtaagagcttcaagagtagaattgaccaaagacatcataacagcaattgatgccatt
gtagataaatacggagaaataaaagacaacgcctctcctgctctagccggaattcgtcag
aacatgaatttagttcgtggcaaagtaaatcaaagttttggtttagcgctgactcaatac
aacggcttaggatatctggatgatataaaggaaagctttgtacaaaatcgtagagttcta
gcagttttagcaatgtatcgccgtaaagtaaaaggttctattttaggaagttcgaaaacc
ggaagtattgcttatatagaaccagaagctactttaaagtattctagagaattagccaat
ttagaatacgaagaaaaagaagagattacgcgaatattaaaaaatttatcaaacgtaatt
cgtccttatcttcctttgttaatcgaatatcaggagtttttaagtgatattgatgtagtt
gctggaaaagcaaaatatgctaatcgcattaacggaattcttccagcaataacagaagaa
aggcgattattttttagagaagcgtatcatccaattttgtatctaaataataaacagaaa
aaagaagttacgcatccgcagaccatagagttaaaacaagaaaacagaattattgtaatt
tctggtccaaatgctggaggaaaaactatttcgttaaaaacggtcggtttattgcaatta
atgctgcaatctggaattttgattccggttcacgaacgcagcgagactttcttatttgac
agaatcctgactgacattggggacaaccaatctattgaaaatcacttaagtacttatagt
taccgattaaaaaacatgaattactttttaaagaaatgtaataacaaaaccatgttttta
attgacgaatttggtacaggttctgatcccgaacttggtggagctttagctgaaattttc
ttagaagaattttatcatcgagaggcattcggaattattacaacacattattctaattta
aaaattctagcaaacgaattaccatacgcaacaaatgcgaatatgatgttcgatgaaaaa
tcacttgagccaatgtacaaactggctttgggtcaggctggaagttcgtttacttttgaa
gtagctcagaaaaatggaattccgtttggattgatcaatcgtgcgaaaaagaaaatcgaa
gttggaaaagttcgttttgacaagaccattgcaacacttcaaaaagagcgttcaaaactg
gaaaaaacttctttaaatttaaaagaagaagaaaccagagctcgtgaagaaagtaaaaag
atggaaaacatcaatactaaaattcagcagaaactggaaagctatcaagaattatacgac
agtaaccagaagattatatatataggacaaaaaattgatgatatagctgaaaaatatttc
aacaacaaaaacaaaaaagagcttattggtgaatttttgaaaattgttgagatcgaaaac
tctaaacgtaaaaaagcaactccgaaagaagctaaagcaaaagttgaaaaacaaaaagaa
attattgccgaagtacaagtaaaagttgaagaaattcgaaaagagaaaaaagagaagaaa
ttaaagccggttattgaaaaaccaaaaccaattttaaaagttggtgatcgagtaagaatg
cttgatggaagatctgttggtagtattgatataattgaaaaaaataaagcaacagtaaat
tatggcctatttacctcaaaagtaagtttggacgaattggaattagtagaagctgttaaa
aaataa
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