Flavobacterium johnsoniae UW101: Fjoh_3368
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Entry
Fjoh_3368 CDS
T00508
Name
(GenBank) Topoisomerase IB-like protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fjo
Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fjo03032
]
Fjoh_3368
03400 DNA repair and recombination proteins [BR:
fjo03400
]
Fjoh_3368
Enzymes [BR:
fjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Fjoh_3368
DNA replication proteins [BR:
fjo03032
]
Prokaryotic type
DNA Topoisomerases
Fjoh_3368
DNA repair and recombination proteins [BR:
fjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Fjoh_3368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
TIL_2
Motif
Other DBs
NCBI-ProteinID:
ABQ06382
UniProt:
A5FEI6
LinkDB
All DBs
Position
complement(4027967..4029049)
Genome browser
AA seq
360 aa
AA seq
DB search
MNTARTQKLMSQLIKTPHLVLEKLELVYVNNQNLPIERCQGEDGFIYKKNGRCIKQKSEI
KRFNSLVLPPAWVNVKITDLSNGHLQAVGLDVKNRKQYRYHPKWNLIRNQTKFYKIAEFG
QKLPSIRKQVDIDLEQKEWSKEKVIALVIRLMEETHIRIGNEKYAKDNKSYGLSTLRKRH
ININKNSLRFEFIGKKGKQHTITTRNKQLIKLVSRCEEIPGWEVFKYYDKNGERRVLDSH
MVNEYLHAISGEYFSAKDFRTWAASIIFFENLMELGIASDEKEIKKNIITAYDATAEALG
NTRNVCKNYYVHPLLVSTYEDGSIEPYFDKVKKSRSNKKYFSRSESVFAELIENYQVSLL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgccagaactcaaaaactaatgagccagcttattaaaacacctcatttggtg
ctggaaaagctagaattagtttacgtaaacaatcaaaatttgcctattgaaagatgtcag
ggagaagatggttttatttataaaaaaaacggacgctgtattaagcagaaaagcgaaata
aagcgttttaacagtttggttttaccgccggcctgggtaaatgtaaaaatcaccgattta
tcaaacgggcatttgcaagctgtaggtttagatgttaaaaacagaaaacagtacagatat
catccaaaatggaacttaatccgtaatcaaaccaagttttacaaaatcgcagaattcgga
caaaagcttccctctatacgaaaacaagtagatattgatttagaacaaaaagaatggtcg
aaagaaaaagtaattgcactcgtgatcaggttaatggaagaaacccacatccgaattgga
aatgaaaagtacgccaaagacaataaatcatacgggctttcgactttgcgaaaaagacac
atcaatatcaataaaaattcccttcgttttgaattcatcggcaaaaaaggaaaacagcac
accattaccacaagaaacaaacagttgattaaactggtaagccgatgcgaagaaattccg
ggctgggaagtttttaaatattacgataaaaacggcgaaagaagagttttagacagtcac
atggtaaatgaatatctgcacgctatttcgggcgaatattttagtgccaaagactttaga
acctgggcagcctcaattatattctttgaaaatttgatggaactcggtattgcatcagac
gaaaaagaaatcaaaaaaaatattattacagcttatgatgccactgctgaggcattggga
aacaccagaaatgtctgcaaaaattattacgttcatccgctgctggtttcgacatatgaa
gatggttcgattgagccgtattttgataaagttaaaaagagccgaagcaataaaaaatac
ttctcaagaagtgaaagcgtatttgcagaattaattgaaaattatcaggtcagtttgttg
tag
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