Flavobacterium johnsoniae UW101: Fjoh_3451
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Entry
Fjoh_3451 CDS
T00508
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo03030
DNA replication
fjo03430
Mismatch repair
fjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Fjoh_3451
03430 Mismatch repair
Fjoh_3451
03440 Homologous recombination
Fjoh_3451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fjo03032
]
Fjoh_3451
03400 DNA repair and recombination proteins [BR:
fjo03400
]
Fjoh_3451
Enzymes [BR:
fjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Fjoh_3451
DNA replication proteins [BR:
fjo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Fjoh_3451
DNA repair and recombination proteins [BR:
fjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Fjoh_3451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
RNase_H_2
DNA_pol_A_exo1
DUF7508
T5orf172
Motif
Other DBs
NCBI-ProteinID:
ABQ06465
UniProt:
A5FEB0
LinkDB
All DBs
Position
4117274..4118635
Genome browser
AA seq
453 aa
AA seq
DB search
MYAILDIETTGGQFNEEGITEIAIYKFDGHEVVDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFYEVAKRIIEITTDCVIVAHNASFDYRILRTEFRRLGYDFEAKTLCTVELAKKL
IPEQPSYSLGKLVRALGIPMADRHRASGDAMATTKLFKMLLEKDVEKTIVKDFIKLEVEK
GISPKFLDIVNQMPAKTGVYYIYKEDGTLIYIGKSQNIKKRVNQHFTGITTKSKRIQAEV
FTITYDETGSELIALLKESQEVKVNRPRYNRSQKKSVFPVALYAEKDSNGYINLRLEKAD
GRKKEITSFASLQEGKNALFRFTSKYHLCQKLTGLYQTKKECFQYKIKECDGACIGEVTP
EVYNLRVQQFISENSFENKSIVLIDRGRNVNERSAILIENGIYKGYAYYDLNYQITNIDI
LKNILVPMQHNRDVKNIIQSYIRKSKSIKILQF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaatactagacatagaaaccactgggggacaatttaatgaagagggaattact
gaaatcgctatctacaaatttgatgggcatgaagtagttgatcaattcatcagccttgtc
aatcctgaaattcccattcagcctttcgtagtaaaactgaccggaattaataatgctatg
ttacgttctgcaccaaaattctacgaagttgctaaacgaattatagaaattactacagat
tgcgttattgtcgctcataatgcttcttttgactatagaatcctgagaaccgaatttcgt
cgtttgggttatgatttcgaagccaaaacgctttgcacagtagaattagccaaaaaacta
attccagaacagccttcatacagcttaggaaaactggttcgcgcacttggaatccctatg
gccgacagacaccgtgcaagcggagacgctatggcaaccacaaagctgtttaaaatgctt
ttggaaaaagatgtcgaaaaaaccatcgtaaaagattttataaagctggaagtagaaaaa
ggaatttctccaaaattcttggatattgtaaatcaaatgcctgctaaaactggtgtttac
tatatttataaagaagacggaactttaatttacattggcaaaagccaaaatatcaaaaaa
agagtcaatcagcattttaccggaattacaaccaaaagcaaaagaatccaggcagaagtt
tttaccataacgtatgatgaaaccggaagcgaattaatcgcgcttttaaaagaaagccag
gaagtaaaagttaatcgtccacgatacaatcgttcgcagaaaaaatctgtatttcctgta
gctttatatgccgaaaaagattcaaacggttatatcaacttaagactggaaaaagctgac
ggacgtaaaaaagaaattacctcttttgcttcgttacaagaaggaaaaaatgcacttttc
agatttacgtcaaaataccatttgtgccaaaaacttacaggtttatatcaaaccaaaaaa
gagtgttttcaatataaaatcaaagaatgtgacggcgcctgcatcggcgaagttacgcca
gaagtttacaatttaagagtacagcaattcatttcagaaaacagctttgaaaacaaaagc
atagtattgatagacagaggtagaaatgtaaacgaacgaagtgcaattctaattgaaaac
ggaatatacaaaggttacgcctattacgatcttaattatcaaattacgaatatcgacatc
ttaaaaaatattctggtcccaatgcagcataaccgcgatgtaaaaaatatcattcagagt
tatatccgcaaaagcaaatcaataaaaatacttcaattttaa
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