Flavobacterium johnsoniae UW101: Fjoh_3870
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Entry
Fjoh_3870 CDS
T00508
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fjo
Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fjo02000
]
Fjoh_3870
Transporters [BR:
fjo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Fjoh_3870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_21
Motif
Other DBs
NCBI-ProteinID:
ABQ06881
UniProt:
A5FD39
LinkDB
All DBs
Position
complement(4597112..4598608)
Genome browser
AA seq
498 aa
AA seq
DB search
MMKKIKYIVAALLGVFAMQSCDTAELELKNPNTLSPDTFFKTAAQVESSVNAAYANLQTR
GLYARNLAFAMDLMGQDAAGNPQLEGNKKPFQDFSFNAGNDIIQYYWESCFLGISRANFV
LDNADKINALPDVVLSQERKNKFLGEAHFLRAYYYFLLVNRFGDLPIYKTGTIVGAARSP
KAEVYNLIRDDFEFASQNLLSKNGEQAGRATKEAAYAYLGKVLLYEKKYDLALAALNNVT
GFSLEDKGSFYNNFMEETEHGKESVFEIEFNENNGTGNKWDDAGNSGGTGFAESTLRGQE
YGNLSWFNVYPPDALLDSYEAGDLRFDDTFYVPGSKYLKGTLTMTAQNFNTSAGLRRAGW
KKYQNYYKKEDEATQSSINFKVMRYSDVLLMKAECENQRDGGSQTAAIAYITQVRDRAGL
TTAIAPTKEAVFAAIVHERKVEFAGEQSRFDDIIRWGIASTELAGTGFQAGKNELWPIPN
RETSSNPNIKPSDNNPGY
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaaataaaatatatagttgcagcattgttgggagtttttgcaatgcagtca
tgcgacactgcggaattagaattaaaaaatccaaatacgctttcgcccgatactttcttt
aaaactgcagcacaggtagaatcttctgtaaatgcagcgtatgcaaatttacagacaaga
ggactttatgcccgaaacctagcttttgcaatggatcttatggggcaggatgcagcagga
aatccccagttagaagggaataaaaagccttttcaggatttttcttttaatgccggaaat
gatattattcagtattattgggaatcttgctttttaggaatatccagagctaattttgta
ctggataatgcagataagattaatgctctgccagatgtagttttatcacaagagagaaaa
aataaatttttgggagaagcacattttttaagagcttattattatttccttttagtaaat
cgttttggtgatttaccaatttataaaaccggaactattgtaggcgcggcaagaagccct
aaagcagaagtttataatttgattagagatgattttgaatttgcttctcaaaaccttctt
tctaagaatggtgaacaagcaggaagagccacaaaagaagctgcttatgcttatctgggt
aaagtattactttatgaaaagaaatacgatctggctttagccgctttaaacaatgttaca
ggattcagccttgaagataaaggcagtttttacaacaacttcatggaagaaacagaacat
ggaaaagaatctgtttttgaaattgaatttaatgaaaacaacggaactggtaacaaatgg
gatgatgcaggaaatagcggcggaactggttttgctgagtcaactctgagaggacaggaa
tacggtaatttgagctggtttaatgtgtatccgccagatgcgctgctggattcttatgag
gctggagatttacgttttgacgatactttttatgttccgggttcaaaatatttaaaagga
accctaactatgacagcgcaaaattttaatacatctgcaggacttagaagagcaggctgg
aaaaaataccagaattattataaaaaagaggatgaagcaacacaatcgagtatcaacttc
aaagttatgcgttattcagatgtactgcttatgaaagcagaatgcgaaaaccaaagagat
ggaggttcacagactgccgccattgcctatatcacacaagtaagagatcgtgcaggttta
acaactgccattgctccaacaaaagaagctgtttttgctgcaattgtgcacgaacgtaaa
gttgaatttgcaggagagcaaagccgttttgatgatattatcagatggggcattgcgagc
acagagttagcaggaacaggttttcaggctggtaaaaatgaattatggccaattccaaac
agagaaacatcttctaatccaaatataaaaccaagcgataacaatcctggttattaa
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