Flavobacterium johnsoniae UW101: Fjoh_4000
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Entry
Fjoh_4000 CDS
T00508
Name
(GenBank) helix-turn-helix-domain containing protein, AraC type
KO
K20968
AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
Organism
fjo
Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fjo03000
]
Fjoh_4000
Transcription factors [BR:
fjo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Fjoh_4000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
ExsA_N
HTH_AraC
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
ABQ07010
UniProt:
A5FCR3
LinkDB
All DBs
Position
4782776..4783588
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AA seq
270 aa
AA seq
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MNDSKINQKNSPIAYSCYYTQNREGEQFASQHVLSFQISGVLTLNNGSKEYVFNPGDFRF
IRRNQLIKFIKQPDPNTAFQSISIYLNQEALRDYSIQYNQKTSLIKSPETEMVLQLKEVP
LLKSFMNSLIPYINEDQLITEELQALKVNEAITILLQCNPELKDILFDFNEPGKIDLEAF
MKKNFHFNVQLDRFAYLTGRSLATFKRDFQRIFDISPSRWLIQKRLQEAYYQIKEKGKTP
SEVYLEVGFEDLSHFSFAFKKQFGMPPSKV
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattctaaaataaatcagaaaaactcgccaattgcttattcctgttattacaca
cagaacagagaaggcgaacagtttgcttcacagcatgttttgagtttccaaatttcggga
gtactgactcttaataacggcagtaaagaatatgtttttaatcctggtgattttagattc
attagaagaaatcagctcataaaattcatcaaacaaccggatcctaatacagcttttcag
tctatttcgatttatctcaatcaggaagcgcttcgggattattctattcaatacaatcaa
aaaacgagtttaattaaaagcccggaaacagaaatggttcttcagttaaaagaagtgccg
ttattaaaaagctttatgaattcgctgattccgtacataaacgaagaccaattaattacc
gaagaacttcaggctttaaaagtaaatgaagctattacgattttactgcaatgcaatccg
gaattaaaagatattctttttgattttaacgaacccggaaaaattgatctggaagcgttt
atgaaaaagaatttccattttaacgtgcaactagatcgttttgcgtatttaaccggcaga
agtcttgcaacttttaaaagggattttcagcgtattttcgatatttcgccaagccgatgg
ctcattcagaaaagattacaggaagcgtattatcaaattaaagaaaaaggaaaaacacct
tctgaagtttatttggaagtaggttttgaagatttatcgcatttttcgtttgcgtttaaa
aaacagtttggaatgcctccttctaaagtttga
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