Flavobacterium johnsoniae UW101: Fjoh_4728
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Entry
Fjoh_4728 CDS
T00508
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo00061
Fatty acid biosynthesis
fjo00071
Fatty acid degradation
fjo01100
Metabolic pathways
fjo01212
Fatty acid metabolism
fjo02024
Quorum sensing
fjo04146
Peroxisome
Module
fjo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Fjoh_4728
00071 Fatty acid degradation
Fjoh_4728
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Fjoh_4728
09145 Cellular community - prokaryotes
02024 Quorum sensing
Fjoh_4728
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fjo01004
]
Fjoh_4728
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fjo04147
]
Fjoh_4728
Enzymes [BR:
fjo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Fjoh_4728
Lipid biosynthesis proteins [BR:
fjo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Fjoh_4728
Exosome [BR:
fjo04147
]
Exosomal proteins
Exosomal proteins of breast milk
Fjoh_4728
Exosomal proteins of breast cancer cells
Fjoh_4728
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABQ07727
UniProt:
A5FAN8
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All DBs
Position
5713413..5715191
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AA seq
592 aa
AA seq
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MVSITRLFDFPYYQQETYNLPVALANKKNGVWEKTSTEEYIAKANAVSRALLRMGVQKDD
KIALISSNNRTEWNIMDIGILQTGAQNVPIYPTIAEEDYEYILNHSGSIYCFVSDDEVLQ
KVNAIKANVPTLKEVYSFNEIPGCKHWSDLLLAGEDESNQSEVEARKDSIHTDDLATIIY
TSGTTGRPKGVMLSHKNIVSNVLDSAPRIPFDPGKSTALSFLPICHIFERMILYIYQYYG
VSVYFGESIDKISDNLKEVRPTVITAVPRLLEKVYDKIYAKGTELTGIKKKLFFWAIDLG
LKYEPYGANGFWYEFQLKIARKLIFSKWKEGLGGKLDLMVSGSAALQPRLSRVFAAAEIP
VMEGYGLTETSPVIAVNDQRNRGFKIGTVGKPIRNVEVKIAEDGEILLKGPNVMLGYYKD
PEKTAEAVIDGYFHTGDIGEIDSEGFLKITDRKKEMFKTSGGKYIAPQMIENAMKQSRFI
EQIMVIGEGEKMPGAFIQPNFEFVKEWAKIHKITLGSSDAEISSNPDVIKRIDEEVESIN
KKFGHWEQVKRFELTPDVWSIDGGQLTPTLKLKRKIIKEIYKDLYAKIYDHN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaatcacacgcctttttgattttccctattatcaacaagaaacttacaacctc
ccagttgctctggcaaacaaaaaaaacggagtctgggaaaaaacatccaccgaggaatat
attgcaaaagctaatgccgtttcgagagcattattgcgcatgggcgttcaaaaagatgat
aaaattgctttaataagttctaataaccgtaccgaatggaatataatggatattggtatt
ttgcagactggtgcgcaaaatgttccaatttatccaacaattgcagaggaagattacgaa
tatattttaaatcacagcggcagtatttattgctttgtttctgatgacgaagttttacaa
aaagtaaatgcaattaaagccaatgtgcctactttgaaagaagtttattcttttaatgaa
attcctggatgcaaacactggtcagatcttcttttggccggcgaagacgaaagcaatcaa
agcgaagttgaggccagaaaagacagcatccacacagatgatttagctacaattatttat
acttccggaactacaggaagacctaagggcgttatgctttctcataaaaatatcgtttca
aatgttctggacagtgctccaagaattccatttgatccgggaaaaagcactgctttgagc
tttctgccaatctgccatatttttgaaagaatgattttatacatttatcaatattatgga
gtttcggtttattttggagaatctattgataaaatcagcgataacttaaaagaagttcgt
ccaactgtaattacagctgtaccacgacttttagaaaaagtttacgataaaatttacgca
aaagggactgaattaacaggtatcaagaaaaaactttttttctgggctattgatttaggc
ttaaaatatgaaccatacggagcaaatggcttttggtatgaatttcaattgaaaatcgcc
cgcaaacttattttcagtaaatggaaagaaggtttaggaggaaaattagacttgatggtt
tccggaagtgccgctttacagccgcgcttatcaagagtttttgctgctgcagaaatcccg
gttatggaaggatatggtttaacagaaacttctcccgtaattgccgttaacgatcaaaga
aacagaggatttaaaattggaaccgttggaaaaccaatccgcaatgttgaagttaaaatt
gccgaagacggagaaattttattaaaaggtccaaacgtaatgctgggttattataaagat
cctgaaaaaactgcagaagctgttattgacgggtatttccatacaggcgatattggagaa
attgacagtgaaggtttcttaaaaattaccgaccgtaaaaaagaaatgtttaaaacttca
ggaggtaaatatattgcgccgcagatgatcgaaaatgccatgaaacaatctcgttttatt
gagcagattatggttattggcgaaggtgaaaaaatgcctggagcttttattcagccaaac
tttgaatttgtaaaagaatgggcaaaaatccataaaattactttgggaagttctgatgcc
gaaattagttcaaatccagatgttattaaacgtatcgatgaagaagtagaaagcatcaac
aaaaaattcggacactgggaacaagtaaaacgctttgaattaacaccagatgtatggtct
atcgatggcggacagcttactcctactctaaaattgaaacgtaaaatcattaaagaaatc
tacaaagatctttacgctaaaatctatgatcataattaa
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