Flavobacterium johnsoniae UW101: Fjoh_4942
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Entry
Fjoh_4942 CDS
T00508
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fjo
Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fjo03009
]
Fjoh_4942
Enzymes [BR:
fjo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Fjoh_4942
Ribosome biogenesis [BR:
fjo03009
]
Prokaryotic type
ribosomal protein modification factors
Fjoh_4942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ABQ07941
UniProt:
A5FA30
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All DBs
Position
5969791..5971104
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AA seq
437 aa
AA seq
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MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLRANGKEVTHEATAKDEGNIIVINTCGFI
DNAKAESVNMILEYADKKDKGLVDKVFVTGCLSERYRPDLEKEIPNVDQYFGTTELPQLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHVSQPIEKLVKEA
QGLAKNGVKELILIAQDLTYYGLDLYKKRNLAELLEALAAVEGIEWIRLHYAYPTGFPMD
VLELMKREPKICNYIDIPLQHISDSILKSMRRGTTQAKTTQLLKDFRAAVPGMAIRTTLI
VGYPGETQEDFEILKEFVQEMKFDRMGCFAYSHEENTHAYLLEDDVPDDVKQARANEIME
LQSQISWDLNQEKVGQVFRCIIDRKEGAHFVGRTEFDSPDVDNEVLIDASKHYVKTGEFV
NIKIIEATEFDLYGEPA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaagtctttaaaaaagaacaaaattaacgtaatcactcttgggtgttcaaaa
aatgtatatgacagtgaagtgcttatgggacaacttcgtgctaacggaaaagaagttaca
cacgaagccactgctaaggatgaaggaaacattattgtaattaacacttgtggatttatt
gacaacgcgaaagctgaatcagtaaacatgattttggaatatgctgataaaaaagacaaa
ggtttagttgataaagttttcgttaccggatgtttgtctgaacgttacagacctgattta
gaaaaagaaattccaaatgtggatcaatattttggtacaactgagttacctcaattattg
aaagctttaggagccgattataaacatgaattattaggagaaagattaactacaactcct
aaaaattatgcctatttaaaaattgccgaaggatgcgacagaccttgcagtttctgtgca
attccgttaatgagaggttcgcatgtttctcagccaattgaaaaattagttaaagaagca
caaggtttagcaaaaaacggcgttaaagaattaatattaattgctcaggatttgacttat
tacggtttagatctttataaaaagagaaatctggcagaattattagaagctttagcagct
gttgaaggaattgaatggattcgtctgcattatgcttatcctaccggtttcccaatggat
gttttggaattaatgaaacgcgagccaaaaatttgtaattatattgatattccattgcag
catatttcagattcaattttgaaatcaatgcgtcgtggtacaactcaggctaaaacaact
cagttattaaaagatttccgtgctgcagttccgggaatggcaattagaactactttaatt
gtagggtatccaggagaaacgcaggaagattttgaaattttgaaagagtttgttcaggaa
atgaagtttgacagaatgggatgttttgcatattctcatgaagaaaacactcatgcttac
ttacttgaagacgatgttccggacgatgtaaaacaggcaagagcaaatgaaatcatggag
cttcagtctcaaatttcatgggatctaaaccaagagaaagttggacaagtatttagatgt
atcattgacagaaaagaaggtgctcattttgtgggaagaacagaatttgacagcccggat
gttgacaacgaagttttaattgacgcatctaagcattatgtaaaaacaggcgaatttgtt
aatatcaagataattgaagcaacagaatttgatttatacggagaacctgcttaa
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