Flammeovirga kamogawensis: KM029_01320
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Entry
KM029_01320 CDS
T07412
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fka
Flammeovirga kamogawensis
Pathway
fka03030
DNA replication
fka03410
Base excision repair
fka03420
Nucleotide excision repair
fka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KM029_01320 (polA)
03410 Base excision repair
KM029_01320 (polA)
03420 Nucleotide excision repair
KM029_01320 (polA)
03440 Homologous recombination
KM029_01320 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fka03032
]
KM029_01320 (polA)
03400 DNA repair and recombination proteins [BR:
fka03400
]
KM029_01320 (polA)
Enzymes [BR:
fka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KM029_01320 (polA)
DNA replication proteins [BR:
fka03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KM029_01320 (polA)
DNA repair and recombination proteins [BR:
fka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KM029_01320 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KM029_01320 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Sipho_tail
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
QWG07608
LinkDB
All DBs
Position
1:334941..337751
Genome browser
AA seq
936 aa
AA seq
DB search
MKKLFLLDGMALIFRAHFALIRNPRINSKGVNTSAPMGFVNSLLEILKKQNPTHIAVSFD
LPAPTFRHKMFSEYKANRQETPEDISIAIPIVKKIVDAFNIPRIEMEGYEADDVIGTLAK
VASKKGFQTYMMTPDKDYAQLVDENTFLYRPSTKGGIEILGVNEVLEKFDLDRIDQVIDL
LGLQGDAVDNIPGVPGVGPKTACKLLKQYSTVEGIIEHSDELKGKLKERVQGNVEQALMS
KELATIKIDVPVEFNEQDLLISEPNKEELIKIFTELEFKTLLQRVFPGEKKAVTPKKSIK
AGEQASLFGGSASSATTSTASEPEDVVEEEIIIEKSTFATVDKNYRLVDSPERYEELVSY
LSKQKEFAFDTETTSLDALEAEVVGMSFSAAKDEAYYVPVPLDKKQADIIFTYFKPLFAN
QEILKIGQNLKYDLQVLETANVDVKGPFFDTMLAHYLLEPDKRHGMDAISEVYLNYIPVS
IETILGKKGKKQKNMKDMSVQEVYEYACEDADVTLQLREVFEPLLKNKGLDKLFTNLEMP
LMETLKDMEREGVNLDVESLEKYSIELASSVEQLEKEIYLLAGEEFTISSPKQLGIVLFE
KMKLVEKPKKTKTGQYATGEEVLQGLRNHEIVGKILDFRQLNKLKSTYVDALPKLIKSDG
RVHTTYNQAIAATGRLSSTDPNLQNIPIKTSRGREIRKAFVARNNDYTFVAADYSQVELR
IMAAFSGDKEMIDAFKNGRDIHTATAAKVFKVAESDVDSEMRRKAKTANFGIIYGVSAFG
LSQQLNIPRSEAKALIDAYWEEFPSVKKYMDDVIGKARDNEYVETLMGRRRYLRDINSRN
FTVRGMAERNAINAPIQGTAADIIKKAMIEIQAWMKLEGLKSKMILQVHDELIFDVYNEE
LDLLKAKVKELMEGADDIGVPLEVEIGEGNNWLEAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattatttctgcttgatggtatggcattgatttttcgtgcccactttgcttta
atacgtaatccacgtatcaattctaaaggagtgaatacaagtgcacctatgggctttgta
aactctctattagaaattcttaaaaagcagaatcctactcatatagctgtatcttttgat
ttacctgctccaacattccgacataaaatgtttagtgaatacaaggcaaatagacaagag
actcctgaggatatatcaatagcaattccaatagtgaaaaaaattgtagatgcttttaat
attcctagaattgagatggaaggatatgaagcagatgatgttattggaacattagctaaa
gtagcatctaaaaagggttttcagacatatatgatgacacctgataaggattacgctcaa
ttagtggatgaaaatactttcttataccgtccttctacgaaaggaggaattgaaatttta
ggcgtcaatgaagttttagagaagtttgatttagaccgtattgatcaagtaattgatttg
ctaggtttacaaggtgatgccgttgataatattcctggtgtacctggggtgggaccaaaa
actgcttgcaagttattaaaacaatatagtacagtagaaggtattattgaacattctgac
gaactaaaaggcaaacttaaagaacgtgttcaaggtaatgttgagcaagcattaatgtct
aaagagttagccactattaagatagatgttcctgttgagtttaatgaacaagatttactt
atttctgagccaaataaagaggaattaataaaaatatttactgaattagaatttaaaact
ttacttcagagagtttttccaggagaaaagaaagccgtaacgccaaagaaatcaataaaa
gcaggtgaacaagcttctttattcggaggaagtgcttcaagtgctactacttcaacagct
tcagaacctgaagacgttgtagaagaagagataataattgaaaaatctacatttgctact
gtagataaaaattatagattggtagattctccggaaagatacgaagagttagttagttat
ttaagtaaacaaaaagagtttgcttttgatactgaaacaacttctttagatgctttggaa
gctgaagttgtagggatgtcgtttagtgcagccaaggacgaagcatactatgtgcctgtt
ccactagataaaaagcaagcagatattatatttacttattttaagcctctttttgcaaat
caagaaatacttaaaataggtcagaatttaaaatatgatttacaggtacttgagactgct
aatgttgatgtaaaaggccctttcttcgataccatgctggcacattatctattagagcca
gataaacgacatggtatggatgcgatttcggaagtttacttaaattatatacctgtttca
atagagactattttaggtaaaaaaggaaagaagcaaaaaaacatgaaagatatgtctgtt
caagaagtatatgaatatgcttgtgaagatgcagatgtaacacttcaattgagagaagtt
tttgaaccactcttaaaaaataaaggacttgataaattgttcactaatctagaaatgcct
ttaatggaaacattaaaagatatggaaagagaaggggtgaatttagatgtagaatcttta
gagaagtattctattgaattagcaagttctgtggaacaattagaaaaggaaatctatctt
ttagcgggtgaagagtttacaatttcttctccgaagcagctaggaatagttctttttgaa
aaaatgaagcttgttgaaaagcctaaaaagacaaaaacaggacagtacgcaacaggtgaa
gaagtattgcaaggtttaagaaaccatgaaatagtaggtaagatcttagatttccgtcaa
ttaaataaattgaaaagtacttatgtagatgcacttcctaagctgattaaatcagatgga
agagtgcatacaacgtataatcaagcaattgccgcaacaggacgtttatcatctacagat
cctaacttgcagaatattccaattaaaacatcaagaggtagagaaattagaaaagcattt
gtcgctagaaataacgattatacttttgttgctgccgattattctcaagttgaattaaga
attatggctgcttttagtggtgataaagagatgattgatgcttttaaaaatggaagagat
attcatacagcaactgcagctaaagtatttaaagttgcagaaagtgatgtagattcagaa
atgcgtagaaaagctaaaactgccaattttggtattatctatggtgtatctgctttcggg
ttatctcaacagcttaatataccaagaagtgaagcaaaagcattaattgatgcatattgg
gaagaatttccatctgtcaaaaagtatatggatgatgtgataggaaaagcaagagacaat
gaatatgtagaaacattaatgggtagaagaaggtatctaagagatattaattctagaaac
tttactgtacgtggtatggccgaaagaaatgctatcaatgctccaattcaaggtactgct
gcagatattatcaaaaaagcaatgattgagattcaagcttggatgaaattggaaggttta
aaatctaaaatgattttgcaagttcatgatgaattaatttttgatgtttataatgaagaa
ttagatcttcttaaagcaaaagttaaagaattaatggagggtgctgatgatattggagtt
cctttagaagtagaaataggcgaaggtaataattggcttgaagcacactga
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