Flammeovirga kamogawensis: KM029_01950
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Entry
KM029_01950 CDS
T07412
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
fka
Flammeovirga kamogawensis
Pathway
fka00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fka00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KM029_01950 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fka01007
]
KM029_01950 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fka03016
]
KM029_01950 (lysS)
Enzymes [BR:
fka01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
KM029_01950 (lysS)
Amino acid related enzymes [BR:
fka01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KM029_01950 (lysS)
Transfer RNA biogenesis [BR:
fka03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KM029_01950 (lysS)
Prokaryotic type
Other AARSs
KM029_01950 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Rho_N
NDUFB10
DUF4332
TOBE_3
Motif
Other DBs
NCBI-ProteinID:
QWG07726
LinkDB
All DBs
Position
1:487467..489221
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AA seq
584 aa
AA seq
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MQILSEQEVLRREKRQQLMDLGIDPYPAEKFDVNVSAADILKNFERRPNDYGTVSIAGRL
MSVRAMGKAAFIELQDATGRIQVYISRDDICPGEDKTLYNTVFKKLLDRGDFIGIEGFVF
TTQVGEISIHAKKLKVLSKALKPLPAVKVTKDEDGKETVHDAFTDPELRYRQRYVDLVVN
KGVKETFMKRTKIMNAMRNFFNDHGHLEVDTPVLQGIPGGAAASPFITHHNALDTPLYLR
IANELYLKRLIVGGFDGVYEFSRNFRNEGMDRTHNPEFTAVEIYVAYKDYNWMMEFTEQC
LEHVANAANGSSEVTVGNKEISFKAPYRRVTMADAILENTGKDINGKNVEELKAICDELG
IPHDETMGKGKLIDEIFGEKCEGNYIQPTFITDYPVEMSPLCKRHRDNPELTERFELMVN
GKEVANAYSELNDPVDQRERFEEQMKLMDAGDDEAMFIDQDFLRALEYGMPPTSGLGIGI
DRLVMLLTNNASIQEVLFFPQMRPEKWPEASSEAQWAEIGVGEDLIQVMHKLGFYMTSDL
ADKTSGKLMNDFIGMKKKLKLKQIPNPSKDVVEGWIAKAAEQNA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcttagcgaacaagaagtactccgaagagaaaagagacaacagttaatggat
cttggtattgatccatatccagccgaaaagtttgatgtaaatgtatcggcagcagatatt
cttaagaatttcgaacgccgtccaaacgattatggaactgtatctatagcaggtcgtttg
atgagtgttcgtgcaatgggtaaggcagcttttattgagctacaagacgctacaggacga
attcaagtatatatctctagagacgatatctgtccaggagaagataaaactttatataat
acggtattcaagaaattacttgatagaggtgattttattggtatcgaagggtttgttttc
actacacaagtaggtgaaatttcaatccatgcaaagaagttaaaagtgctttctaaagca
ttaaaaccacttcctgctgtaaaagtaacgaaagatgaagatggaaaagaaactgtacat
gatgcatttactgatcctgaattacgttaccgtcagcgttatgttgatttagtggtaaac
aaaggcgtgaaggaaacgttcatgaaaagaacgaaaatcatgaacgcaatgcgtaacttc
tttaacgatcacggacatttagaagtagatactccggtattacaaggcattcctggtgga
gcagcagcaagtccgtttattacacaccacaatgctttagatactcctttatatttaaga
attgccaacgaattatacttaaaacgtttaatcgtaggtggttttgatggtgtatatgaa
ttctctcgtaacttcagaaatgaaggtatggatagaacacataacccagaatttactgca
gttgaaatctatgtagcgtacaaagattacaactggatgatggaatttactgagcagtgt
ttagagcacgttgctaatgcagcaaatggttcttctgaagtaactgttggtaataaggaa
atctcattcaaagctccttaccgtcgtgtaacaatggcagatgctattttagaaaacaca
ggtaaagatattaacggtaaaaacgttgaagaattaaaagctatttgtgatgagttagga
attcctcatgatgaaacaatgggtaaaggtaaattgattgacgaaatctttggtgaaaaa
tgtgagggtaactatatccaaccaactttcattacagattatcctgttgagatgtctcct
ttatgtaaacgtcatagagataatcctgaattaacagaacgttttgagttaatggtaaac
ggtaaggaagttgcgaatgcatattctgagcttaatgaccctgttgaccaacgtgaacgt
tttgaggagcaaatgaaattaatggacgcaggagatgacgaggcaatgtttattgaccaa
gacttcttacgtgcattagaatatggtatgcctccaacatctggtttaggtattggtatt
gatcgtcttgtgatgttattaactaacaatgcatcaatccaagaagtattattcttccct
caaatgcgcccagagaaatggccagaagcttcttcagaagcacaatgggcagaaattggc
gtaggtgaagacttaattcaagtgatgcataaacttggtttctacatgacttctgattta
gcagataaaacatctggtaagttgatgaatgatttcattggaatgaaaaagaaactgaaa
ttaaaacaaatccctaacccatcaaaagatgttgtagaaggatggatagcgaaagcagca
gagcaaaacgcatag
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