Flammeovirga kamogawensis: KM029_03875
Help
Entry
KM029_03875 CDS
T07412
Name
(GenBank) transporter substrate-binding domain-containing protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
fka
Flammeovirga kamogawensis
Brite
KEGG Orthology (KO) [BR:
fka00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fka01011
]
KM029_03875
Enzymes [BR:
fka01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KM029_03875
Peptidoglycan biosynthesis and degradation proteins [BR:
fka01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KM029_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lig_chan-Glu_bd
SLT_2
DUF3318
Motif
Other DBs
NCBI-ProteinID:
QWG08085
LinkDB
All DBs
Position
1:973174..974652
Genome browser
AA seq
492 aa
AA seq
DB search
MDYKQKITTLFYILFIFLFSCSTPKSAEQNTEKEVIETEALDTLVFSNKDLPEIKERGHL
KALTAYSSTSYFIYKGQSMGYEYELLKKLSEDLNLDLKLHVIKNIDSLSLSLKDGTGDLI
AYGLAITKDRQENIDFTTPLMQVKQVLIQKKPSNWRKIPKHKTDAQLIRNVVDLADKEVH
VRENTPYHLRLNNLETETGENINIVFADKNTSTEELIRKVSIGEIPYTVADENIAKVNST
YYSNIDYETAMSFPQRIAWATRKQSPELRKVVSHWLDSMKNTTDFYVIYNKYFKNVRAQH
KRFDSKYFSSVEHRGLLSKYDEIIKENAKAIDWDWLLLSSLIYQESKFEPHAKSWVGAVG
LMQLMPATAKQYGAHNPRDPRQNIRAGSKYLKWLDGFWKEIEDPNERLKFVLASYNTGQG
HVQDAQRLAKKYKHDPTIWDGNVEKYLLLKSRKSYYRDEVVRFGYARGSEPVHYVQSILA
RYKSYDELLRNN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggattacaagcaaaaaattacaacgctgttctatatactttttatttttcttttctca
tgttctacacccaaaagtgccgaacaaaataccgaaaaggaagtgatagaaactgaagct
ttagacactttagtttttagtaataaagaccttcctgaaattaaagaaagaggacattta
aaagcacttactgcatacagttctacatcgtactttatttataaagggcaatctatgggc
tatgagtatgagctacttaagaaactttctgaagatttaaacttagatttaaaactacat
gttattaaaaatattgatagtttaagtttaagtctaaaagatggtactggcgatttaatt
gcctatggattagctatcacaaaagatcgacaagaaaatatcgatttcaccactccttta
atgcaagtgaaacaggttttaattcagaaaaaaccaagtaactggagaaaaatccctaag
cacaaaactgatgctcagctgatcagaaatgtagttgatttagcagataaggaagtacat
gttagagaaaacacaccctatcatttaaggttaaataacctcgaaactgaaactggagag
aatattaatattgtttttgcagataaaaacacatccacagaagaattaattagaaaagtt
tctattggtgaaatcccatatactgttgctgatgaaaatatagcaaaagtaaacagtacc
tactatagcaatattgattatgaaacagcaatgagttttcctcaaagaattgcttgggct
actcgaaaacaatctcctgaattaagaaaagtggtttctcattggctagatagcatgaaa
aacacaacagatttttatgtcatctacaataaatatttcaaaaatgttagagcacaacac
aaacgttttgacagtaaatatttcagttctgtagaacatagaggattactttctaaatac
gatgaaatcattaaagaaaatgcaaaagcgatagattgggattggttacttctttcttca
cttatctatcaagaatcaaaatttgaacctcatgcaaaatcttgggttggtgctgtagga
ttgatgcaattaatgccagcaactgccaaacaatatggtgcacataaccctagagatcct
agacaaaatattcgtgcaggttctaaatatctaaaatggcttgatggtttctggaaggaa
attgaagatccaaacgaacgtcttaaatttgtattagcatcttataatactggccaaggg
catgtacaagatgctcaaagacttgcaaaaaaatacaagcacgatcctactatttgggac
ggtaatgtagagaaatacttacttctaaaaagtagaaaatcttattatagagatgaagta
gttcgctttggctatgccagaggaagtgaaccagtgcactacgtacagagtattttagcg
agatataaaagttatgatgaattgttaagaaataattaa
DBGET
integrated database retrieval system
