KEGG   Flammeovirga kamogawensis: KM029_04215
Entry
KM029_04215       CDS       T07412                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
fka  Flammeovirga kamogawensis
Pathway
fka03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fka00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KM029_04215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fka03019]
    KM029_04215
Enzymes [BR:fka01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     KM029_04215
Messenger RNA biogenesis [BR:fka03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     KM029_04215
SSDB
Motif
Pfam: DEAD Helicase_C ResIII SNF2-rel_dom CMS1
Other DBs
NCBI-ProteinID: QWG09148
UniProt: A0ABX8GZV3
LinkDB
Position
1:complement(1062050..1063600)
AA seq 516 aa
MKNFAPKNTGVTTLEYNEYTGAFKLVEFNNVDHLGGDPELTFLPQKPGAEQEQAAALEEK
RKEDEGLGFRKFKLNKQLYTVCDELGYTEPTPIQDKAIPLVLSGHDLFGIAQTGTGKTAA
YLLPLLFKAKYAQGNDPRVLILVPTRELAIQVGKEVEKLAVYTGLRHAVVYGGIGPKTQI
EEVEKGIDLLVGTPGRVMDIYSRGKLKTKSIKYMVLDEADRIMDMGFMPQIRQMLEIIPR
KRQNLLFSATMPDVVVRLSEEFLEFPQRVEITPQATTAEMVDQFVYFVPNFMTKLHLLAY
LMNTDSSLSRIMVFVRKKDHANGVAAFLQRNTEGEVRVIHANKGQNARINSIDDFKEGNV
RVLVATDVAARGIDVSMVSHVVNFDVPVMYHDYVHRVGRTGRANNTGVAYTFCNPAEKYH
LLKIEEVINKEIPVLEMPEEVEEQEAPQHEIRDMAMEIDRQKRKEDPNFKGAFHERKKNK
DKVDKNRRNKNKVSIDKQRASGKVSAYISQGKSKKK
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgaagaattttgcccctaaaaatacaggagtaactactttggaatataatgagtacact
ggagcgtttaagttagttgaatttaataatgtagatcacttaggaggtgatcctgaatta
acatttttacctcaaaaacctggagctgaacaagaacaagctgcagcactagaagagaaa
agaaaagaagatgagggattaggtttcagaaaattcaaattaaacaaacaattatatacc
gtttgtgatgaacttggatatacagaaccaacacctattcaagataaagctattcctctt
gtattatcaggacacgatttatttgggattgcccaaacaggtactggtaaaacggctgct
tatttattaccactattatttaaagctaaatacgctcaagggaatgatcctagggtgctt
atattagtaccaacaagagagttagctattcaggttggtaaagaagttgaaaaattagca
gtatatactggtttaagacatgcggtagtttatggtggtattggaccaaaaacacagata
gaggaagtagaaaaaggaattgatttattagttggtacacctggtagagtaatggatatt
tattctagagggaaattgaaaactaagtcaattaaatatatggtactggatgaggctgat
agaattatggacatgggttttatgccacagattcgtcagatgttagaaattattcctaga
aaacgacagaaccttttgttctctgcaactatgccagatgtcgttgttcgtttaagtgaa
gagttcttagaatttcctcaaagagttgaaattactccacaagcgactactgcagaaatg
gtagatcagtttgtttatttcgtacctaactttatgacgaaactccaccttcttgcttat
ttaatgaataccgattcttcattatcaagaattatggtgtttgtccgtaagaaagatcat
gcaaatggagttgctgcatttttacaaagaaatacagagggtgaagtaagggttattcat
gccaacaaaggtcagaatgctagaataaatagtattgatgattttaaagaaggaaatgta
cgtgttttggtagcaacagatgttgctgcaagaggtattgacgtaagtatggtatctcat
gtagttaactttgatgttccggtaatgtatcacgattatgttcaccgtgtaggtagaaca
ggtagagcgaataatacaggtgttgcctatactttctgtaatccagcagagaaatatcat
ttattaaaaattgaagaagttattaataaagaaattcctgttttagaaatgccagaggaa
gtggaagaacaagaagctccacaacatgaaatacgtgatatggcaatggaaattgaccgt
cagaaacgtaaagaagatcctaattttaaaggagcttttcatgaaaggaaaaagaataaa
gataaagtggataaaaaccgcagaaataaaaataaagtttctatcgataagcaacgtgca
agtggtaaagtaagtgcttatatctcacaaggtaagtcgaagaagaaataa

DBGET integrated database retrieval system