Flammeovirga kamogawensis: KM029_06870
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Entry
KM029_06870 CDS
T07412
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fka
Flammeovirga kamogawensis
Pathway
fka03420
Nucleotide excision repair
fka03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KM029_06870
03430 Mismatch repair
KM029_06870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fka03400
]
KM029_06870
Enzymes [BR:
fka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KM029_06870
DNA repair and recombination proteins [BR:
fka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KM029_06870
MMR (mismatch excision repair)
Other MMR factors
KM029_06870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QWG08654
LinkDB
All DBs
Position
1:1765198..1767438
Genome browser
AA seq
746 aa
AA seq
DB search
MDYLEGLNPPQREAVVNMEGPMMIIAGAGSGKTRVLTYKIAHLIANGIEPFQILSLTFTN
KASREMKERIVDAVGDEAKNLWMGTFHSVFAKILRFEADKLGYQSNFTIYDSEDAKSVIK
GVVKDYKLDDKLYKPNVVLSRISSAKNNLISWRSYEANNDMRLEDEAQGRPKIFEIYKEY
AIRCFRANAMDFDDLLFNTNVLFHQHLDVLNKYQHKFKFVMIDEFQDTNISQYYITRKLA
AKNRNICVVGDDAQSIYAFRGANIQNILNFEKDYPELKVIKLEQNYRSTQTIVEAANSVI
KHNKNQLEKSTFTQNGIGDRIEVIRSGSDLDEAKAVAQSIQTAIMRDRIHPQDIAILYRT
NSQSRALEEALVKLSIKAQIFGGLSFYQRKEIKDMVAYLKFVTNPKDEEAFKRVINYPKR
GIGPTTVNNLFVKAAENKLGIWDVVSNIRRFFGGRIATQVENFANMIKVFQMQAEQKNAF
EVASFIAKGSGILRELYEDKTPEGKNRYDNLQELLNGIQGFSDDPSKEDKSLVTYLEEIS
LITSSEKEDMSDAITLMTIHMSKGLEFDYCYIVGMEENLFPSQMMLETREDLEEERRLFY
VAITRAKVKVFLTYALQRYRFGKQISCEPSRFIDEIAPQYISMKRNSISDDLGPGNTPGF
SNYRSLRQAPSNFIKKAVKPKDDRPFVPSKADDLSVGLTVRHMKFGDGKVVKISEEGLDK
RADIQFEEVGKKTLILTFAKLMIIED
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggattatttagaaggattaaacccacctcagcgtgaagctgtagtaaatatggaaggc
cctatgatgattattgcaggtgccggctctggaaaaacaagagttttaacatataaaatt
gctcacctgatagcaaatggtatcgaaccatttcaaatattatcactcacatttacaaat
aaagcttctagagaaatgaaggagcgtattgttgatgctgtaggtgatgaggctaaaaac
ctatggatgggtactttccactctgtttttgctaaaattctacgcttcgaagctgataaa
ttagggtatcaatccaatttcacaatttatgattcagaagatgccaaatccgttattaaa
ggtgtggtgaaagattataaattagatgataaactatacaaacccaatgtggtgctaagt
agaatttcatcagcaaaaaacaacctgatttcgtggcgttcttatgaagccaataatgat
atgcgccttgaagatgaagcacaaggtcgtccaaaaatatttgaaatatataaggaatat
gcaattcgttgctttagagcaaatgcaatggattttgatgaccttcttttcaatacaaat
gtacttttccatcagcacttagatgttctgaacaaatatcagcataaatttaagtttgta
atgattgatgagtttcaggataccaatatctcccaatattatatcactcgtaaactagca
gccaaaaatagaaacatttgtgttgttggtgatgatgcccaatcaatttatgcatttaga
ggtgctaatattcagaatatcttaaattttgagaaagattatccagaattaaaagtcatt
aaactcgagcaaaattaccgttctactcaaacaattgtagaagctgcgaactcggtaatt
aagcacaataaaaatcaacttgaaaaaagtacttttactcaaaatggaattggtgacaga
atagaagttattcgttcaggatctgatttagacgaagcaaaggctgttgcacaaagtatt
caaacagcaattatgagggatcgtattcaccctcaagatattgctattttataccgtacc
aattcgcaatctagagcactcgaagaagccctagttaagttatctattaaagcacaaata
tttggtggactatccttctaccagagaaaagaaattaaggacatggttgcttacctaaag
tttgtaactaaccctaaagacgaagaagcttttaaacgtgttatcaattacccgaaaaga
ggaattggaccaacaactgtaaacaatttatttgtaaaagcagctgaaaataaattgggt
atttgggatgttgtatctaacatcagacgcttttttggtggtagaatagcaactcaagta
gaaaactttgccaacatgatcaaggttttccaaatgcaagcagagcaaaaaaatgctttt
gaggtagcttcatttattgccaaaggttctggtatactacgtgagttatatgaagataaa
actccagaaggaaaaaatagatacgacaaccttcaagaacttcttaatggtattcaaggt
ttctcagatgatccctcaaaagaagacaaaagcttggtgacttatttagaggagatttca
ttaattacatcttcagaaaaagaagatatgagtgatgcaattacacttatgacgatccat
atgtcaaagggtcttgaatttgattactgttacattgttggtatggaagagaatctattt
ccttctcagatgatgttagaaactagagaagatttagaagaagaaagaagattattttat
gtagcaattacacgtgctaaagtaaaagtattcttaacatatgcattacagcgttataga
tttggaaagcaaatatcttgcgaaccaagtagatttattgatgaaattgctcctcaatat
atcagcatgaaaagaaattctattagtgatgatcttggtcctggaaacacgcctggtttt
tctaattaccgttctttgcgtcaagctccttctaattttataaaaaaagcagtaaagcca
aaagacgacagaccttttgtaccatcaaaagcagatgatttatctgttggactcacggtt
agacacatgaaatttggcgatggaaaagttgtcaaaatttctgaagagggattagataaa
agagccgatattcaatttgaagaggtaggtaaaaaaacattaatattaacttttgctaaa
ttgatgatcattgaagattaa
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