Flammeovirga kamogawensis: KM029_12260
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Entry
KM029_12260 CDS
T07412
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fka
Flammeovirga kamogawensis
Brite
KEGG Orthology (KO) [BR:
fka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fka03019
]
KM029_12260
03009 Ribosome biogenesis [BR:
fka03009
]
KM029_12260
Messenger RNA biogenesis [BR:
fka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KM029_12260
Ribosome biogenesis [BR:
fka03009
]
Prokaryotic type
rRNA processing factors
KM029_12260
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
DnaJ_CXXCXGXG
RNase_E_G_Thio
DUF4829
Motif
Other DBs
NCBI-ProteinID:
QWG06126
LinkDB
All DBs
Position
1:complement(3050035..3051594)
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AA seq
519 aa
AA seq
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MSNELVINSTQEGSRIALMRDKSLVELHYDNDETKFQVGDIYLGVVRKVVPGLNAAFIDI
GYEKDAFLHYLDLGPKVKSLLKYIKLAQGKHHKHVSENLKQFRLEPEIDKLGKINDVLKQ
NQKIMVQVVKEPISTKGPRLSCELSLAGRYLVLVPFSNTVNISKKITDAGERRRLLKLVN
SIKPENFGVIIRTVAEGKEVSELDKDLRDLNLKWAEGVEKLKVAKPREKVIGEINRATSM
LRDILNESFDSITVDDKDAYEEIRRFILQIAPDKAGIVKFYSGKAKLFEHHGIEKQLKTL
FGQTVSLGSGGYLVIEHTEALHVIDVNSGNKSNAENNQEATAFNVNIEAATEIARQLRLR
DMGGIIVIDFIDMKKAEHKQKLYQHMKAEMKADRSKHTVLPLSKFGLMQITRQRVRPELS
IVTKEKCPTCNGTGKITASIAIADQIEAEIMHLMENQNDQKIKVGVHPYLFSYFTGGFPS
RRMKWFFKHFKWIKIFEDSSLGLSEYKFFDHHDEEISLK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaatgaattagttatcaattcaacgcaagaaggaagcagaattgcccttatgcga
gataaaagtctggtagaacttcactatgataatgacgaaacaaaatttcaagtaggtgat
atctatttaggagttgttcgtaaagtagttcctggtctaaatgctgcatttatagatata
ggatacgaaaaggatgccttcttacattacttggatttaggtccaaaagtaaaatcactc
ttgaaatatattaaactggcacagggtaagcaccacaaacatgtgagtgaaaacctaaag
cagtttcgtctagaacctgaaattgataaacttggtaaaatcaatgatgtcctgaaacaa
aatcaaaagattatggttcaggttgttaaagaaccaatatcaacaaaaggaccaagatta
tcatgtgaactctctttagcaggacggtacttagtactagttccttttagtaatactgtc
aatatatctaagaaaattacagacgcaggagaaaggcgtaggctattaaagcttgtgaat
tctataaagcctgaaaatttcggagtaattatacgaacagttgcagaaggaaaagaagta
tctgaactagataaggatttaagagacctcaacctaaaatgggcggaaggtgttgaaaaa
cttaaagttgcaaaacctagagagaaagtaattggagaaataaatcgtgctacttcaatg
ttgagagatatcttaaatgaatcttttgatagtatcactgtcgatgacaaggatgcatat
gaagaaataagacgttttattctgcaaatcgcaccagacaaagccggtatagtgaaattc
tattctggtaaagcaaagctttttgagcaccatggtatcgaaaagcaattaaagacactc
tttggacaaactgttagcttaggaagtggaggatatttagtaatagaacatactgaagcc
cttcatgtgattgatgttaatagtggaaacaagtcgaatgcagagaacaatcaagaagct
actgcattcaacgtaaatatagaggctgctacagaaatcgctcgtcaattacgtttacgt
gatatgggtggcatcatcgttatagacttcattgatatgaagaaagctgaacacaagcaa
aagttgtatcagcatatgaaggcggagatgaaagcagatcgctctaaacacacagtttta
ccattgagtaaattcggtttaatgcagatcacaaggcagcgtgtgagacctgaattaagc
atagtaactaaagagaagtgtccaacttgtaatggaacaggtaaaataacggcctcgatt
gcaattgcagatcaaatagaggcagagattatgcacctaatggagaatcagaacgaccaa
aaaattaaagttggtgttcatccatacttattctcttactttacaggaggttttccttct
cgaagaatgaaatggttctttaaacatttcaaatggattaaaatatttgaagattcgtca
ttaggactatctgaatacaagttttttgatcatcatgatgaagaaatttctttaaaatga
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