KEGG   Flammeovirga kamogawensis: KM029_15480
Entry
KM029_15480       CDS       T07412                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
fka  Flammeovirga kamogawensis
Brite
KEGG Orthology (KO) [BR:fka00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fka02048]
    KM029_15480
Enzymes [BR:fka01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     KM029_15480
Prokaryotic defense system [BR:fka02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   KM029_15480
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII HSDR_N_2
Other DBs
NCBI-ProteinID: QWG06698
LinkDB
Position
1:3822333..3825554
AA seq 1073 aa
MPTTTKIYEDDIEQDMIKLLQQQGFDYLKGSELELDYTDNTERSSYKEVVLKQQLMQALK
RINPHSPEHQLTEALDAMLNLQEHEQLVETNEEFYKLLIGGYAVEGSEEEDTHRIYYVDF
IHPENNEWKVVNQFTVIDVAHCRPDVMLFVNGLPVVVVELKRPTDASATTKTAYDQLQRY
KKEIPKLFHYNTLMIISDGVKAMAGSTTAPYSRFLPWKSIDGSTEAAKNKPELEVITKGL
LQKDILLELIRDYTVFEKEKDIIELENGKHDIRTQVIKKIAAYHQFFAVRKAIEATRQAS
SEKGDGKAGVVWHTQGSGKSLSMVFFSKKMEQELDNATLIVLTDRNDLDNQLFNTFASCG
QKAEQIESNDDLKQKLKRDSGGMFFTTIQKFGISKEDKEQQTVYEFPQLSDRRNIIIVAD
EAHRTQYGFTGKAEKDKAGEYTGKISFGFAKYIRDAFPNASFLGFTGTPIEAEDVNTPEV
FGNYIDIYDIQQAVEDGATVPIFYESRLAKIKMIEGVDIDSEADKLADEYNVEQEKKEAT
KLEALIAHPDRLRSVAEDIVSHYSARRAAFTEGKGMIVTMSREIAVKLYDEIIKVKPEWH
SDSLDEGAVKVVMTSAPTDEDRYGKAFTKHATTKEQREDLAARVKDVNDPLQLVIVRDMW
LTGFDAPCLTTLYVDKPMKGHGLMQAIARVNRVFPGKAGGLVVDYLGIASELKKATKDYT
RSGGKGEPVETQNQAVKIVKEKLEVVNDFFREGTFDIERYHSNYATSFERIEVLNDAVDH
IQGLEHDEEGTAKRFRTQVMALVKAHSLAVPHPDVMKIEVQRQVAFFHAVKSVLDKLDPS
SEPLDQDEKGQQNNAYFKQLIQQLVQDSIEADGVVDILEEAGMESPELSILSDDFLAEVQ
NMKRKNLAIELLKKLLTDQIKAKGKSNIAKSKKLSERLQDAILRYQNKIISAVEILEEMI
ALSKEITAEEERMIALGMSATEIAFYDTLADNKSAKDLMEDDTLMQLASVIVENIQKKAK
IDWTKREKVKAQLRLAIKKQLKKFGYPPDQQKLATQKILQQTEQLAKELAKAS
NT seq 3222 nt   +upstreamnt  +downstreamnt
atgccaacaactaccaaaatatacgaagacgacatcgaacaagatatgatcaagcttttg
caacaacaagggtttgactatctcaaagggtctgaactagaactcgactacacagacaat
acagaaagaagtagctacaaagaagtagtcttaaagcagcagttgatgcaagcgttaaaa
cgcatcaatccacactctccagagcatcagttgacagaagctttagatgccatgctcaac
cttcaagaacacgaacagttagtagaaaccaacgaagaattttacaaactgctgataggt
ggttatgcggtagaaggtagcgaagaagaagacacacaccgtatttattatgtagatttc
attcaccccgaaaataacgaatggaaggtagtcaatcagtttacagtcatagatgtagcc
cattgtagacccgatgttatgctgtttgtaaatggtttacctgtagtagtggtggagtta
aaaagacccacagatgcaagtgcaactactaaaacagcctacgaccaactacaacgttac
aaaaaagaaataccgaagctgtttcattacaacaccctcatgattatttctgatggagtg
aaagcaatggcaggttctacaaccgcaccttacagtcggtttttaccatggaaaagtatt
gatggcagtacagaagccgccaagaataaaccagaactagaagtcattaccaaaggtctt
ttacagaaagatatacttcttgaactgatacgtgattataccgtttttgaaaaagaaaaa
gacattatagaacttgaaaatggcaaacacgatatcaggactcaagtcattaaaaagatt
gctgcttaccaccaattctttgccgtaaggaaagcaattgaagccacaaggcaagcttct
tctgaaaaaggagatggaaaagcaggtgtcgtttggcatacacaaggaagtggtaaatcg
ctttctatggtcttctttagtaagaagatggagcaagaattagacaatgctacactcatt
gtactcaccgatagaaacgaccttgataatcaattgttcaatacctttgctagttgtggg
caaaaagcagaacagattgagtctaacgacgatttaaagcagaaactaaagcgtgatagt
ggtggaatgttctttacaaccatacaaaagtttggtatttcaaaagaagataaagaacag
caaaccgtttatgaatttcctcagctttccgatagaagaaatataattattgttgccgat
gaagcccaccgaacacagtatggtttcacaggtaaagcagagaaagacaaagcaggagag
tacacaggtaaaatctcttttgggtttgcaaaatacatcagagacgccttcccgaatgct
tcattcttaggctttacgggtacacccattgaagcagaagacgttaacacaccagaagtt
tttggtaactacatcgacatctatgatatacaacaagcggtagaagatggggcaacagta
ccgatattctatgaaagtcgtttggcaaaaatcaagatgattgagggagtggatattgat
agtgaagccgataaattggcagacgaatacaatgtagagcaagagaaaaaagaagcaaca
aaactcgaagcactgattgcacaccccgatcgtttacgttcagtagcagaagatattgta
agccactattcagcgcgtagagctgcttttacagaaggtaaaggcatgatcgttaccatg
agtagagaaattgcggtaaagctgtatgatgagattattaaagtaaagcccgaatggcac
agtgatagcctagatgaaggagccgtaaaagtagtcatgacttctgctccaacagatgaa
gaccgctacggtaaagcttttacaaaacatgcaacaacaaaagaacaaagagaagacctt
gctgcaagagtaaaagatgtcaatgatccacttcaattggtcattgtgcgtgatatgtgg
ttaacaggtttcgatgcaccatgcctcacaacactctatgtagacaagcccatgaaagga
cacggcttaatgcaagccattgcaagagttaatcgagttttcccaggtaaagcaggagga
ttagtagtcgattacttaggcatcgcttcagaacttaaaaaagcaacaaaagactatact
cgaagtggaggaaaaggagaacctgtagaaacacagaaccaagctgtaaaaattgtcaaa
gagaaactagaagtagtgaatgacttctttagagaaggcacatttgacatagaacgctat
cactccaattatgccacatcttttgagcgcattgaagtactcaacgatgcagtagatcat
attcaaggtttagaacacgatgaagagggtacagccaaacgttttagaacacaagtaatg
gcattagtaaaagcccactccttagccgtacctcatcccgatgtaatgaagattgaagta
cagcgtcaggttgccttttttcatgccgtaaaatcggtattagataagctagacccatca
agtgaaccattagatcaggacgaaaaagggcagcaaaacaacgcctactttaaacaacta
attcaacaattagtacaggattctatagaagccgatggcgtagtagatattttggaagaa
gcaggaatggaatcaccagaactttccatcctatccgatgatttcttggcagaggtacaa
aacatgaaacgtaagaacctcgccatagaactccttaaaaagctgctcacagaccaaata
aaagctaaaggaaagagtaacattgcaaagtcgaaaaagctatcagaaaggcttcaagac
gctatcttacgctaccaaaacaagatcatctctgcggtagaaattctagaggaaatgatt
gccctctctaaagaaatcacagcagaagaagaacgcatgattgcactcggaatgtctgcc
acagaaatagccttttatgatacattagccgacaacaaaagtgctaaagacctaatggaa
gacgatacactcatgcaactcgcatctgtcattgtagaaaacattcagaagaaagccaaa
atagactggacgaagcgagagaaagtaaaagcacaactccgtttagccatcaaaaagcag
ttaaagaagttcggttacccaccagatcagcagaagttggccacacagaaaatattacaa
caaacagagcaattggctaaggaattggcgaaggcttcttaa

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