Flammeovirga kamogawensis: KM029_17350
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Entry
KM029_17350 CDS
T07412
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fka
Flammeovirga kamogawensis
Brite
KEGG Orthology (KO) [BR:
fka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fka03009
]
KM029_17350 (rimO)
Enzymes [BR:
fka01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KM029_17350 (rimO)
Ribosome biogenesis [BR:
fka03009
]
Prokaryotic type
ribosomal protein modification factors
KM029_17350 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
DUF1265
Motif
Other DBs
NCBI-ProteinID:
QWG07046
LinkDB
All DBs
Position
1:4269598..4270914
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AA seq
438 aa
AA seq
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MKTKTLKENKVNIITLGCSKNIVDSEVIMTQLKGNGIDVVHEAEDDKFNIALINTCGFIG
HAKTESIETILRYADAKKEGLIDKVYVSGCLSERYKEDLVNEIPEVDAFFGTREVPNLLR
ALNADYKKELLGERLLTTDKHFGYLKIAEGCDRPCSFCAIPLMRGKHVSTPIEELVKQAE
DMVAKGVKEILLIAQDLTYYGLDIYKKRRLADLLRALSDVEGLEWIRLHYAYPTGFPMDV
IDVMKERDNIANYLDIPLQHGSTEMLKRMRRGTSREKQEQLINDIRAKIPNIAIRTTLIT
GHPGETEEEFEEMLDFVERMRFERVGVFTYSHEEDTHAGDDMEDTIPEDVKQERADEIMQ
IQEEISAELNQEKVGKVFRVLFDKIEGGYFVGRTEYDSPEVDNEVLVPVEEKNHVRLGDF
ADVKITSAEPFDLYGEIV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaccaagacacttaaagaaaataaagtcaatataattacactcggttgttctaag
aacattgtagactctgaggtaataatgacacagttaaaaggtaatggcattgatgtagtt
catgaagctgaagatgataagtttaatattgctttaatcaacacttgtggatttattggg
catgcaaagacagaatctattgaaacgattctacgttatgcagatgctaaaaaagaagga
ttaattgataaggtatatgtttctggttgtttatcagaaagatataaagaagacttagta
aacgaaattcctgaagttgatgcattttttggtacaagagaagttccaaatttgttgaga
gctttaaatgcagactataaaaaagaattattgggtgagcgtcttcttactacagacaaa
cactttggttatttaaagattgcagaaggttgtgaccgaccttgttctttctgtgcaatt
cctttaatgagaggaaaacacgtttcaacaccaatagaagaattggtgaaacaagcagaa
gatatggttgcgaaaggggtaaaagaaatacttcttattgcacaagatttaacatattat
ggtcttgatatttataaaaagagacgtttagcagatttactaagagcattatcagatgtt
gaaggtttagaatggatacgtttgcattatgcttacccaacgggcttcccaatggatgta
attgatgtaatgaaagagcgtgataatatcgctaattaccttgatattcctttacagcat
ggctcaacagagatgttgaaacgtatgcgtagaggtacatctagagaaaaacaagagcaa
ttgattaacgatatccgtgcaaaaattcctaatatcgctattcgtacaactttaattact
ggtcaccctggtgaaacagaagaagagtttgaagaaatgttggattttgttgagcgtatg
cgttttgagcgcgtaggtgtatttacctattctcatgaagaagatactcatgcaggagac
gacatggaagatacaattccagaagatgtaaaacaggaaagagcagatgagattatgcaa
attcaggaagaaatttctgctgagcttaatcaagaaaaagttgggaaagtattccgtgtt
ttatttgataaaattgaaggtggttattttgtaggaagaacagaatacgattctcctgag
gtagataatgaagtattagtacctgtagaagaaaagaatcatgtacgtttaggtgatttt
gcagatgtaaagattactagtgcagaaccatttgatttatatggcgagattgtttaa
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