Flammeovirga kamogawensis: KM029_24455
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Entry
KM029_24455 CDS
T07412
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fka
Flammeovirga kamogawensis
Pathway
fka03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fka00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KM029_24455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fka03021
]
KM029_24455
03400 DNA repair and recombination proteins [BR:
fka03400
]
KM029_24455
Enzymes [BR:
fka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KM029_24455
Transcription machinery [BR:
fka03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KM029_24455
DNA repair and recombination proteins [BR:
fka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KM029_24455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QWG09754
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All DBs
Position
2:1604819..1605823
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AA seq
334 aa
AA seq
DB search
MSVLSFQKPDKVVMEKTDNTNKGLFEFKPLERGFGATIGNSFRRILLSSLEGYAVVGVKF
PNVVQESSKINGVVEEVSEIILNLKQIRIKKAANIEEPSQKISVDFSGKTQLTAGDVAQF
TDEYTILNPDLVICNLDGANSLNIELTVHAGRGYLSSKDQLVSDTTDAVGYTPIDAVFTP
IKNVEYHVENTRVEQRTDYEKLVITIETDGSVDPQEALQGAANILIQHFAQITDKDITFE
MQKRETPEELDPVEIKRRAILETSIADLELSVRAYNSLKAGEVKTLGDLVSLEIRDLMKF
RNFGKKTLTELEELLSERDLTFGMDVSKYRLGQD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtactatctttccaaaagccagataaagtagtaatggaaaagaccgataacaca
aataagggtctttttgaattcaaaccacttgaaagaggtttcggtgcaactatcggtaac
tctttcagacgaatattactttcatctctagaaggatacgcggtagtaggagttaaattt
cctaatgtcgttcaagaatcatcaaaaattaatggagtagtagaagaggtatctgaaatt
attcttaatcttaagcagattcgtattaaaaaagctgctaatattgaggagccttcacaa
aaaattagtgttgatttcagtggtaaaactcaacttactgcaggtgatgtagcgcaattt
actgatgagtatacaatcttaaacccagatttagtaatctgtaacttagatggtgctaat
agcttaaatattgaattaactgttcatgctggtagaggttatttatcatcaaaagatcag
ttagtaagtgatactacagatgcagttggatatacaccaattgatgctgtattcacacca
atcaaaaacgtggaataccatgttgaaaatacacgtgtagagcaacgtactgactacgaa
aaacttgtaattacaattgaaactgatggttctgtagatcctcaggaagcgttacaaggt
gctgcaaacattttgattcagcattttgcacaaatcacggataaagacatcacttttgag
atgcaaaaacgtgagactcctgaagaattagatcctgtagaaatcaagagacgtgcaatc
cttgaaacttctattgctgaccttgagctttcagttcgtgcttacaactctttaaaagca
ggtgaagtaaaaactttaggtgatttagtttctcttgaaattcgtgacctaatgaaattc
cgtaactttggtaagaaaacacttactgagttagaggagttattatctgaaagagattta
acattcggtatggatgtttctaaatatcgtttaggacaagattaa
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