Flavobacterium keumense: MG292_01565
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Entry
MG292_01565 CDS
T09003
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fke
Flavobacterium keumense
Pathway
fke03030
DNA replication
fke03410
Base excision repair
fke03420
Nucleotide excision repair
fke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MG292_01565 (polA)
03410 Base excision repair
MG292_01565 (polA)
03420 Nucleotide excision repair
MG292_01565 (polA)
03440 Homologous recombination
MG292_01565 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fke03032
]
MG292_01565 (polA)
03400 DNA repair and recombination proteins [BR:
fke03400
]
MG292_01565 (polA)
Enzymes [BR:
fke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MG292_01565 (polA)
DNA replication proteins [BR:
fke03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MG292_01565 (polA)
DNA repair and recombination proteins [BR:
fke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MG292_01565 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MG292_01565 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
RNase_H_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WGK94940
LinkDB
All DBs
Position
367615..370443
Genome browser
AA seq
942 aa
AA seq
DB search
MSAKKRLFLLDAYALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLMDVIKREKPDHLAV
AFDNGGSDLRNEIFPEYKAHRDATPEAIKIAVPYIQELLRAMHIPIIEVKGYEADDLIGT
IAKQAEKQNYQVFMVTPDKDYAQLVSENIFMYKPARMGNGIEIWGIPEVLEKFEVERPEQ
VIDFLGMMGDAADNIPGLPGVGEVTAKKLLKEFGSMENLLANTDKLKGKMKDNIEANKDK
GILSKTLATILLDCPVQFDETDYELSTPDVDKTDALFKELEFRRMAEQFDAIFRKGETAP
VIDEAKLYKKPQPKTEEQFDLFGSAINEGSEETRHQYYNSLKNTEHSYQIIQGDLGIKLL
LQNLQNQTSVCFDTETTGLDALHAELVGISFSYEKGKGFYVPFPENQTEAQPLIEKLIPF
FENENIEKIGQNLKYDLKVLSNYGITVKGKLFDTMIAHYLINPDMRHNMDILSETYLKYA
PQSIETLIGKKGKNQKSMREVPLEEIKEYAVEDADVTLQLSELFNTELEKTHTKKLFEEI
EIPLVTVLASMETEGINLDVPFLHSLSKELGDDISQLESRIYEIAGEKFNLASPKQLGDI
LFDKLKIGGAKQKKTKTGQYATGEEILSYLAKDNEIVSAILDWRSLVKLQNTYVEALPLQ
VDSKTHRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFIARDENHTLLSADY
SQIELRIIAALSGEENMIKAFQHGEDIHKSTAAKVFNVPLEEVTKEQRSHAKTVNFGIIY
GVSAFGLSNQTSLSRAESAALIEAYYNTYPKLKSYIQEQIENAREKGFVQTILGRRRYLK
DINSANAVVRGAAERNAVNAPIQGSAADIIKIAMINIHKRLIAENWKSKMLLQVHDELVF
DVHNSEIEKIQPMIKHEMEQAVILSVPLEVEIGIGKDWLEAH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaaaaacgtctttttctccttgatgcctacgccttaatttttagagggtat
tatgccttcataaaaaatccaagaattaactctaaaggattagacacatccgccattatg
ggatttatgaattctttaatggatgtgattaaacgagaaaaaccagatcatttggctgtt
gcttttgataacggaggtagtgatttacggaatgagatttttccagaatacaaagcccat
cgagatgctacgcccgaagctatcaaaattgcggttccttatattcaagaattacttcgt
gccatgcacattcctattattgaggtaaaaggatacgaagcggatgacttaattggtact
attgctaaacaagcggaaaaacagaattatcaagttttcatggtaacacctgataaagat
tatgcgcaactagtttcagaaaatattttcatgtacaaacctgcccgaatgggtaacgga
atcgaaatttggggaatccctgaagttttagaaaaatttgaagtagaacgaccggaacag
gtgattgatttcctgggtatgatgggagatgcagcggataatattcctggtttgcctgga
gtaggcgaagtaaccgctaaaaaattattaaaagaatttggctctatggagaacctttta
gcaaatacagacaagctgaaaggaaaaatgaaggataatattgaagccaataaagacaaa
ggaattttatctaaaactttggcaaccatcttattagattgccccgttcaatttgatgaa
accgattacgagttatctactcccgatgtagacaaaacagatgctttatttaaggaattg
gaatttcgtagaatggcagaacaatttgatgccattttcagaaaaggagaaacagcaccc
gtaatagacgaagccaaattatataaaaaaccacaacctaaaactgaagaacaatttgat
ctttttggaagtgctattaatgaaggttccgaagaaacacgtcaccaatattacaattcg
ttaaaaaacacggagcattcgtatcaaattattcaaggtgatttaggaatcaaattatta
ttgcagaacctacaaaaccaaacttcggtttgttttgataccgaaacaacaggattagac
gccttacacgccgaattggtcgggatttcattttcgtatgaaaaaggaaaaggattttac
gttccatttcctgagaaccaaacagaagctcaacctttaattgaaaaattaattcctttt
ttcgaaaatgaaaacattgaaaaaataggtcagaatttaaaatatgatttaaaagtattg
tcgaattatggcattactgtaaaaggtaaattattcgacaccatgattgcacattatcta
atcaacccggatatgcgtcacaatatggatattttatctgaaacgtatttgaaatatgca
cctcaatctattgaaacgctaattggcaaaaaggggaaaaatcaaaaatcgatgcgtgag
gttcctttagaggaaataaaagaatatgcggtagaagatgctgatgtaaccttacagctt
tctgaactattcaatactgaactagagaaaacacacactaaaaaattatttgaagaaatc
gaaattcctttggttactgttttggcaagtatggaaacagaaggaatcaatctagacgtt
ccatttttacactctttatcgaaagaattaggtgacgatatttctcaattggaaagtcgc
atttacgaaattgcaggagaaaaattcaatttggcttcccctaaacaattgggagatatt
ttatttgacaaactaaaaattggcggagccaaacaaaagaaaaccaaaactggtcaatat
gctactggtgaagaaattctaagttatttagccaaagacaacgaaattgtgagcgctatt
ttagattggcgttcacttgttaaattacaaaatacttatgtagaagctttgcctttgcaa
gtggattctaaaacgcatcgcgttcatactgattatatgcaaaccgtagccgctacagga
cgtttaagctctaacaaccctaatttgcagaacatcccgattcgaacagaacgcggaaga
caaatcagaaaagctttcattgctcgagacgaaaaccatacgctactctctgccgattat
tctcaaatcgaattgcggatcattgctgctttgagcggagaagaaaatatgattaaagct
tttcaacatggagaagacattcataaaagcaccgctgcaaaagtttttaatgtgccttta
gaggaagttaccaaagaacaacgtagtcacgctaaaacggtcaacttcggaattatatac
ggtgtttctgcttttgggttaagcaatcaaacctctttatcccgtgccgaaagtgccgca
ctaattgaagcgtattacaacacttatccgaaactaaaatcatacattcaagaacagatt
gaaaatgcacgagagaaaggttttgtacaaaccattttagggcgtcgccgttatttaaaa
gacatcaactcggccaatgcagtagtacgtggcgcggcagaacgaaatgcagtcaatgct
cctattcaaggaagtgccgcagatattatcaaaatcgccatgattaatattcacaaaagg
ctgattgcagaaaattggaaatctaaaatgttattgcaagttcacgacgaattggtattt
gatgttcacaatagtgaaatagaaaaaattcaaccaatgataaaacacgagatggaacaa
gctgttattttaagtgttccattggaagtggaaattggaataggaaaagattggctcgaa
gcacattaa
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