Flavobacterium keumense: MG292_05525
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Entry
MG292_05525 CDS
T09003
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fke
Flavobacterium keumense
Pathway
fke03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fke00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MG292_05525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fke03021
]
MG292_05525
03400 DNA repair and recombination proteins [BR:
fke03400
]
MG292_05525
Enzymes [BR:
fke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MG292_05525
Transcription machinery [BR:
fke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MG292_05525
DNA repair and recombination proteins [BR:
fke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MG292_05525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
WGK95686
LinkDB
All DBs
Position
1268792..1269784
Genome browser
AA seq
330 aa
AA seq
DB search
MAIFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSALEGYAITSVRIE
GVDHEFSTISGVVEDVTEIILNLKQVRFKRQIEDVDNESVTVSVSGKEQLTAGDFQKFIS
GFQVLNPELVICNLDSKVKLNFDLTIEKGRGYVPAEENKKQNAAIGTIFTDSIFTPVKNV
KYAIENFRVEQKTDYEKLVFEIKTDGSINPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELDELVAVKNLTFGMDLTKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatttaattttcagaagcccgataaagttatcatgatcgattcaaccgatttt
gaaggtaaatttgaatttagacctttagaacctggttatggattgactgttggtaatgca
cttagaagagttttgctttcagcattggaaggttatgcaattacatcggttcgtatcgaa
ggtgtagatcatgagttttctactatttcaggagttgttgaagacgttactgaaattatc
cttaatctaaaacaagtacgtttcaaacgtcaaattgaagatgtcgataatgaatcagtt
actgtatcagtttctggtaaggagcaattaacagctggtgattttcaaaaatttatttca
ggttttcaagttttaaatccagaacttgtaatctgtaatttagatagtaaagtcaaactg
aatttcgatttaactatcgaaaaaggtaggggatatgttcctgctgaagagaacaaaaaa
caaaatgctgcaattggaaccatttttacagattctatttttactccggtaaaaaatgta
aaatatgctattgaaaacttccgtgtagagcaaaaaacagattatgaaaaattagttttt
gaaatcaaaactgatgggtctattaatccaaaagatgcactaaccgaagctgctaaagtt
ttaattcaccatttcatgttgttttcggatgaaagaatcactcttgaggcagacgaaatc
gcacaaacagaatcgtatgatgaagaatcattacatatgagacagttgcttaaaactaag
cttgttgatatggatctttctgtaagagcattaaattgcttgaaagcggctgaagttgac
acacttggtgatttggtatctttcaataagaatgacctaatgaaattccgtaattttggt
aaaaaatcgttaactgaactagatgagttagtggcggttaaaaaccttactttcggaatg
gatttaacaaaatacaaactagataaagaataa
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