Flavobacterium keumense: MG292_06125
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Entry
MG292_06125 CDS
T09003
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
fke
Flavobacterium keumense
Pathway
fke03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MG292_06125 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fke03400
]
MG292_06125 (uvrA)
DNA repair and recombination proteins [BR:
fke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MG292_06125 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MG292_06125 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
AAA_21
UvrA_DNA-bind
AAA_29
AAA_16
nSTAND1
nSTAND3
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_18
AAA_33
NACHT
AAA_22
AAA_23
Viral_helicase1
cobW
NTPase_1
BCA_ABC_TP_C
DUF87
DGKD_4H
DUF5070
Motif
Other DBs
NCBI-ProteinID:
WGK93674
LinkDB
All DBs
Position
complement(1395622..1398405)
Genome browser
AA seq
927 aa
AA seq
DB search
MSIDLSTLDPKKNIIIKGAQVHNLKNVDVAIPRNKLVVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSSYARQFLGRLDKPKVEYIKGIAPAIAIEQKVNTTNARSTVGTSTEIYDYIKL
LYARVGRTFSPISGQEVKKNTVTDVVSDVKKLELDSKWLLLAPIHLEKGRKLEDKLNVLL
QQGFARILIDGEMVRLDDLPKNLTKKEIFLIVDRIVVKAEEEFYNRLADAVQTAFFEGKG
ICYLQELNSEKRFSYSNNFELDGISFLEPNVHLFSFNNPYGACPVCEGYGNIIGIDAELV
VPNTSLSVFENTIFPWRGESMSWYRDELVKNAYKFDFPIHKPFFELTEEQKEVIWTGNQY
FQGLNDFFKELEEKNYKIQNRVMLSRYRGKTKCNSCKGKRLRNEASYVKINGKTVSDLVD
LPIRNLVEFFKNIELNEYEKQIAKRLLIEINNRLSFLTQVGLDYLTLNRNSATLSGGESQ
RINLATSLGSSLVGSMYILDEPSIGLHPKDTERLIKVLLSLRDLGNTVIVVEHDEDIMKA
ADMIIDIGPEAGTHGGNLVAQGTYNEIQQSDSLTSQYLNGNLEISVPKKRRPFKNQIEIK
GARENNLQNIDVSFPLDVLTVITGVSGSGKSTLVKKILFPAMQKKLDNAGEKAGQFTEMT
GSFSHIKHIEYVDQNPIGRSSRSNPVTYIKAYDDIRDLYAKEKLSKVRGYQAKHFSFNVD
GGRCDSCKGEGTINVEMVFMADVQLHCETCNGKRFKKEVLEVSFEGKNINDVLNMTIDDA
IAFFAEHKQTKITQKLQPLQDVGLGYVQLGQSSSTLSGGEAQRIKLASFLVKGATKDKAL
FVFDEPTTGLHFHDIKKLLASFDALIEKGHSIIVIEHNLDLIKCADWIIDLGPEGGENGG
QLLASGTPEEVVKMKKSITASYLKEKL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgacctttctacactagacccaaagaaaaacatcatcattaaaggcgctcaa
gtacataatttaaaaaatgtagacgttgccattccaaggaacaaactggtagtaattacc
ggtctttcgggttctggaaaatcgagtttggcttttgatactttatatgctgaaggtcag
cgtcgctatgtagaaagtttatcgtcttatgcgcgccagttcttaggtcgtttagacaaa
cccaaagtagaatacatcaaaggaattgcacctgctattgctattgaacaaaaagtcaat
acaaccaatgcacgttcaaccgttggaacctcaacagaaatttacgattatatcaaattg
ttatatgcccgtgtaggacgtactttttctcctatttcaggtcaagaagttaaaaaaaat
accgtaaccgatgttgtttctgatgtaaaaaaattagagctggacagcaaatggctcctc
ctcgctcctattcatttggaaaaagggcgaaaactagaagacaaactgaacgtcttgttg
caacaaggttttgctcgaattctaatcgacggcgaaatggttcggttggacgatttacca
aaaaatttgactaagaaagaaatctttctgattgttgatcgaatcgttgtcaaagccgaa
gaagaattttataatcgtttggccgatgctgttcaaacagcattttttgaaggaaaaggg
atttgctatttgcaagaattaaactcagagaaacgtttttcgtattccaataattttgag
ctagacgggatttcttttttagaacccaatgtgcatttattcagctttaataatccctat
ggggcttgtcccgtttgcgaaggctacggcaatatcattggaattgacgccgaattggtg
gtgccaaataccagcttatccgtttttgaaaatactatttttccttggcgaggcgaaagt
atgagttggtatagagatgaattggttaaaaatgcctacaaatttgacttccctattcac
aaaccttttttcgagcttaccgaagaacaaaaagaagtaatttggacaggaaatcaatat
tttcaagggttaaatgacttttttaaagaattagaagagaaaaactataagattcaaaac
cgtgtgatgttgtctcgctaccgaggcaaaactaaatgcaactcctgtaaaggaaaacgt
ttacgaaatgaggcttcttatgtaaaaataaatggcaagaccgtttcggatttggtagat
ttacctattcgtaacctagttgaattcttcaaaaacattgaacttaacgagtacgaaaaa
caaatcgctaaacgactactaattgagatcaacaaccgtttgtctttcttaacccaagtg
gggctagattacctaactctaaatcgaaattcggctacactttccggaggcgaatcgcaa
cgcatcaacttggcgacttctttaggaagtagtttagtaggttctatgtatattttggac
gaaccgagtattggcttacatccaaaagacactgaacgcttaattaaagttttattgtct
ttacgagatttaggcaataccgtaattgtagtagagcatgacgaagatattatgaaagct
gccgatatgattatcgatattggtcctgaggctggaacccatggtggaaatttagttgct
caaggcacgtataatgaaattcaacaatcggattcattaacttctcaatatttgaatggt
aatttggaaatttcagttcctaaaaaacgtagacctttcaaaaatcaaatcgaaatcaag
ggagcaagagaaaacaatttgcaaaacattgacgttagctttccgcttgacgttctaact
gtaattacaggggtttctggaagtggtaaaagtactttggtaaaaaagattttatttcct
gctatgcaaaaaaaacttgataatgcgggagaaaaagcagggcagtttactgaaatgacc
ggctcattttcgcacatcaaacacattgaatatgtagaccaaaatcctattggaagaagt
tcgcgttccaatcctgttacctatatcaaggcttatgatgatattcgagatttgtatgcc
aaagaaaagttatctaaagtgagaggatatcaagccaagcacttctcttttaacgtagat
ggtggacgttgtgatagttgcaaaggagaaggaaccattaatgttgaaatggtttttatg
gccgatgtgcaactgcattgcgaaacctgtaacggaaaacgtttcaaaaaagaggtttta
gaagttagttttgaaggcaagaatatcaatgatgttttgaatatgaccattgatgatgct
atcgccttttttgctgaacataaacaaactaaaataactcaaaaattacaaccccttcag
gatgtgggattgggttatgtacaattaggccaatcgtcttctactctttctggcggagag
gcacaacgtatcaaattagcttcttttttagtcaagggagctactaaagacaaggcgctt
tttgtttttgacgaacctacaacaggattgcattttcacgatatcaagaagctgttagct
tccttcgatgcgttaatcgaaaaaggccattccatcattgtcatagaacacaatctggac
ctcatcaaatgtgccgattggattattgatttaggccctgaaggtggtgaaaatggagga
caattattggcttcaggtacacctgaagaagtagtgaaaatgaaaaaatcaattactgcc
agctatttaaaagaaaaactataa
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