Flavobacterium keumense: MG292_07820
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Entry
MG292_07820 CDS
T09003
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fke
Flavobacterium keumense
Pathway
fke03030
DNA replication
fke03430
Mismatch repair
fke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MG292_07820
03430 Mismatch repair
MG292_07820
03440 Homologous recombination
MG292_07820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fke03032
]
MG292_07820
03400 DNA repair and recombination proteins [BR:
fke03400
]
MG292_07820
Enzymes [BR:
fke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MG292_07820
DNA replication proteins [BR:
fke03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MG292_07820
DNA repair and recombination proteins [BR:
fke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MG292_07820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
T5orf172
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WGK93993
UniProt:
A0ABY8N4B5
LinkDB
All DBs
Position
complement(1739313..1740674)
Genome browser
AA seq
453 aa
AA seq
DB search
MYAILDIETTGGQFNEEGITEIAIYKFDGREVVDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFFEVAKRIIEITSDCIIVAHNASFDYRILRTEFKRLGYDFQAKTLCTVELSKKL
IPEQPSYSLGKLVRALGIPMADRHRASGDAMATTKLFKMLLEKDVEKQILNDFIKHEIQK
GIAPKLLDIIEKLPSKTGVYYIHNEKGNLIYIGKSRNIKKRINQHFTGTSTKSKKIQREV
FTVTYEETGSELIALLKESEAIKINKPIFNRAQRKSIFEWALYTEKDNNGYLNLRLQKAD
GRKKEITSFTTLQEGKNALFRITEKYQLCQKLTGLYQTNSECFQYKIKECDGACIGKITS
KEYNIRVANFIADNSFENQNMILIDRGRTLNERAAILIENGIYRGYTFYELNYQITNIDV
LKTILIPMQHNRDAKTIIQGQIRKSKTLKVISF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaattctcgacatagaaaccacaggaggtcagttcaacgaagaaggaattacc
gaaattgccatttataaatttgatggtcgcgaagtggtggatcaattcatcagtttagtc
aatccagaaatccctattcaaccgtttgtagtcaagttaactggaattaataatgcaatg
ttgcgctccgcacccaagttttttgaagtagccaaacgcattatcgaaatcacttcagat
tgtattattgtggctcacaatgcctcgtttgattaccgtattttaagaactgaattcaag
cgtttaggctatgattttcaagccaagactctctgtacagtggagttatccaaaaaatta
attcctgaacaaccttcgtatagtttaggtaagttagtccgtgccttaggtatcccgatg
gcagaccgacaccgagctagcggtgatgccatggcaacaaccaaattgtttaaaatgctt
ttggaaaaagatgtcgaaaagcaaattttgaatgactttatcaaacacgaaattcaaaaa
ggcatcgcaccaaaactgttggatattatagaaaaattaccttctaaaacaggtgtttat
tatattcataacgaaaaaggaaatttgatttacattggcaaaagccgtaacatcaaaaag
cgcatcaaccagcattttacaggtacttctaccaaatctaaaaagattcaaagagaagta
tttaccgttacttatgaagaaacgggtagcgaactgattgctcttttgaaagaaagcgaa
gccattaaaatcaataaacctatttttaacagagcacaacgaaaaagtatttttgagtgg
gctttatatacagaaaaagacaacaacggttacctgaacttacgtttacaaaaagccgat
ggccgtaaaaaagaaatcacctcttttactacgctacaagaaggaaaaaacgcactgttc
cgcattacagaaaagtaccaattgtgccaaaaactaaccggtttataccagaccaattca
gaatgttttcaatacaaaatcaaagaatgtgatggcgcttgtattggcaaaataacttcc
aaagaatacaatattcgtgtagctaatttcattgccgacaacagttttgaaaaccaaaat
atgattttaattgaccgtgggcgcactctcaacgagcgcgctgccattctgattgaaaac
ggtatttatagggggtatactttttatgagttgaattaccaaatcaccaatattgatgtg
ctaaaaaccattttgattccgatgcaacacaaccgcgatgccaaaacaattattcaagga
caaattaggaaaagtaaaacactaaaagtaatttcgttttaa
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