Flavobacterium kingsejongi: FK004_01035
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Entry
FK004_01035 CDS
T05683
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fki
Flavobacterium kingsejongi
Pathway
fki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FK004_01035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fki03019
]
FK004_01035
03016 Transfer RNA biogenesis [BR:
fki03016
]
FK004_01035
Enzymes [BR:
fki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FK004_01035
Messenger RNA biogenesis [BR:
fki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FK004_01035
Transfer RNA biogenesis [BR:
fki03016
]
Prokaryotic type
tRNA degradation factors
FK004_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
DUF3536
Motif
Other DBs
NCBI-ProteinID:
AWG23904
UniProt:
A0A2S1LJF5
LinkDB
All DBs
Position
222605..224758
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AA seq
717 aa
AA seq
DB search
MIPNVTKEIIDLGDGRSISIETGKLAKQADGSVVVQMGDTMLLATVVSARKASPGIDFLP
LTVDYREKFAAAGRFPGGFFKREARPSDNEILTMRLVDRVLRPLFPDDYHAETQVMIQLM
SHDNSVMPDALAGLAASAALALSDVPFATLISEVRVARIDGKFVINPSREQLALSDIDMM
IGASKDSIAMVEGEMKEISEKEMVEAIKFAHEAIKVQIAAQERLKAIAGKNIVRSYDEER
SDETVYEKVRQASYDKIYAVASAGTGKQERTEKFAEIKEEVKAAFTEEELAENGDLVGKY
FYKTQKEAVRNVILDLGLRLDGRKTTEIRPIWCEVNYLPSVHGSALFTRGETQALATVTL
GTSREANQIDSPTEQGEEKFYLHYNFPPFSTGEAKPLRGTSRREVGHGNLAQRALKNMIP
AENPYTIRIVSEVLESNGSSSMATVCAGTLALMDAGVQMIKPVSGIAMGLISDEKTGRWA
VLSDILGDEDHLGDMDFKVTGTADGITACQMDIKIDGLAYEIMEKALEQARDGRLHILGK
LIEVLDKPNTDVKKHAPKIIKVTIPGNFIGALIGPGGKVIQELQKATGTTIVINEVNEQG
EVEILGTDPDGIQAVLNKIDSLTFKPVLGDPYEVKVIKMLDFGAVVEYLKAPGNEVLLHV
SELAWERTENVSDVVNMGDVFEVKYLGIDPKTRKEKVSRKALLPRPPREEKKEAPKQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgattcctaacgtaacaaaagaaatcatcgatttgggagatggacgaagcatctcaatc
gaaaccggaaaattagccaagcaggcggacggatctgtagtagtacaaatgggcgacact
atgttgttggccactgtagtatctgcacgtaaagcgagccctggtattgactttttaccc
cttaccgtagactaccgtgagaaatttgccgctgcaggacgttttcctggaggctttttc
aaacgtgaagcacgaccaagtgataatgaaatcctaactatgagattagtagaccgtgta
ttgcgtccacttttcccggatgactatcacgcggaaacacaagttatgattcaattaatg
tctcatgacaattctgtaatgccggatgctttggcaggacttgctgcttcggctgcatta
gccctgtctgacgttcctttcgctactttaatttctgaagtacgcgtagcacgcatcgac
ggtaaattcgttatcaacccaagcagagaacaattggcactttctgacatcgacatgatg
attggagcttcaaaagattctatcgctatggtagaaggggaaatgaaagaaatttcagaa
aaggaaatggtggaagccattaaatttgcccatgaagcgattaaagttcagattgctgct
caggaaagactgaaagctattgctggaaaaaacatcgtacgatcttatgatgaagaacgc
agtgacgaaactgtttacgaaaaagtacgtcaggcttcttatgataaaatctacgctgta
gcatctgccggaactggtaaacaggaaagaacagagaaatttgctgaaatcaaagaagaa
gtaaaagcagcattcacggaagaagaattggctgaaaacggtgatcttgtagggaaatat
ttctacaaaacacagaaagaagcggttcggaatgtgatcctggatttaggattacgtctt
gacggaagaaaaactaccgaaatcagacctatctggtgtgaagtaaactaccttccttct
gttcacggatctgcattattcaccagaggtgaaactcaggctttggctacagtaacactt
ggaacatcaagagaagcgaatcaaatcgactctccaacagaacaaggtgaagagaaattc
taccttcactacaacttccctcctttctctaccggtgaagcaaaaccactaagaggaact
tccagaagagaagtaggtcatggtaacttagcacaacgtgctttgaaaaacatgatccct
gctgaaaatccgtacacaatccgtattgtctctgaagttctggaatcgaatggttcttct
tctatggcaaccgtatgtgctggaacattagcattaatggatgcaggagttcaaatgatc
aaaccagtatccggaattgcaatgggactgatctctgatgaaaaaacaggaagatgggct
gtattatccgatatcttaggagatgaagatcacttaggggatatggactttaaagtaacc
ggaactgcagatggtattactgcctgccagatggatattaaaatagacggattggcgtat
gagatcatggagaaagcccttgagcaggctcgtgacggacgtcttcatattcttggaaaa
ttaattgaagtattagacaaaccaaatactgacgttaagaaacatgctccaaaaatcatc
aaagtaacgattccaggaaacttcatcggagccttaatcggtccaggtggaaaagtaatc
caggaattgcaaaaagctacaggtactaccattgtaatcaatgaagtgaatgagcagggt
gaagttgaaatcttaggtactgatccggacggaatccaggcagtattaaacaaaatcgac
tcccttacattcaaaccggtacttggagacccttatgaagtaaaagtcatcaaaatgctt
gattttggtgctgtagtagaatatttaaaagcgcctggaaatgaagtattacttcacgtt
tctgaactggcttgggaaagaactgaaaatgtatccgatgtggtaaacatgggtgatgta
tttgaagtaaaataccttggtattgacccaaaaaccagaaaagagaaagtttccagaaaa
gcgttgcttccaagacctccacgtgaggagaaaaaagaagctccaaagcaataa
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