Flavobacterium kingsejongi: FK004_06650
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Entry
FK004_06650 CDS
T05683
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
fki
Flavobacterium kingsejongi
Pathway
fki02020
Two-component system
fki02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fki00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FK004_06650
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FK004_06650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fki03021
]
FK004_06650
Transcription machinery [BR:
fki03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FK004_06650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
DUF3874
HTH_Crp_2
MarR
Crp
Peptidase_C37
Motif
Other DBs
NCBI-ProteinID:
AWG24931
UniProt:
A0A2S1LMM0
LinkDB
All DBs
Position
complement(1530600..1532066)
Genome browser
AA seq
488 aa
AA seq
DB search
MLKQFLQLKLSQKLSPQQIQLMKLIQLPTQAFEQRLKEEMVENPALETGKEEDEFEKDEF
ENEEYDDYDEFENDRIEAEDINIDEYLSDDETPEYKLQANNYSDDDEDRSMPLAAPVSFH
QDLINQLNTFILSEDEREIAEFLVGSIDDMGYIRRSIQDIVDDMAFTQGIYTDEKTVERI
LHIVHELEPSGVGARDLQECLLLQLKHKTPTQSIDLATDIIENQFEAFTKKHYDKLLQKY
EVTQDVLKKAVDEIEKLNPKPGGSYAGNNRIVEHVVPDFAIKIVDGELELSLNGRNAPEL
HVSKDYQEMLQTYKDARQKSTQQKEAVQFIKQKLDSAKWFIDAIRQRQETLFVTMNAIMH
YQEEYFLDGDETKLRPMILKDIADMVGLDISTVSRVANSKYVETPYGTKLIKEYFSEAMK
NDQGEDVSTIEIKKILQNTIEDEDKRKPLPDDKLAEILKEKGYPIARRTIAKYREQLDIP
VARMRKKI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagcaattcttacaacttaagttatcacaaaaattatctccacagcaaatccag
ctgatgaagttaattcaattgcctacgcaagcttttgaacagcggctaaaagaagaaatg
gtcgaaaatccagccctggaaaccgggaaggaagaagatgaatttgaaaaggacgaattc
gaaaatgaagagtatgatgattatgatgaattcgaaaatgaccggatcgaagctgaagat
atcaatatagacgaatacctgagtgacgatgaaacgccggaatacaaactccaggcgaat
aattacagtgatgatgatgaagaccgcagtatgcctctggcggctccggtaagcttccat
caggacctgatcaaccagctgaatacttttatattatcggaagatgagcgggagattgca
gaatttctcgtgggcagcattgatgatatgggatacatccgcaggagcatccaggatatt
gtagatgatatggcctttacacagggtatttatacggatgaaaaaacggtagaacgtatc
ctgcacattgtacacgaactcgaaccttcgggtgtgggtgcccgtgatttgcaggaatgc
ctgcttttacaactcaaacataaaacgccaacacagtctattgacctggctaccgatatt
attgaaaaccagtttgaagcttttaccaaaaagcattacgacaaactgctgcaaaaatat
gaagtgacccaggatgtactgaaaaaagcggtggatgaaattgaaaagctcaaccccaaa
cccggtggctcttatgcgggtaataaccgtattgtggaacatgtcgttcctgattttgcg
ataaagattgtcgatggcgagctggaactttcactgaatggcagaaatgcaccggaactg
cacgtttccaaggattaccaggaaatgttacagacctacaaagatgcccgccagaaatcg
acacagcaaaaagaagcggtacagtttatcaaacagaaactggattcggcaaaatggttt
attgatgccatacgccaacgccaggaaaccctgtttgtcaccatgaatgccatcatgcac
taccaggaagaatatttccttgatggggatgagaccaaactgaggccgatgatcctgaaa
gatattgcggatatggttggcttggatatctcaacggtttccagggtagcaaacagcaaa
tatgtggaaacaccgtatggaaccaaattgatcaaagagtacttttccgaggccatgaaa
aatgaccagggcgaggacgtttcaacgattgaaattaaaaagatactacagaatactatc
gaggatgaggacaagcgcaaaccgctacccgatgataaattagccgaaatcctcaaagaa
aaaggctatcctattgcacgaagaaccattgccaaatatcgggaacaacttgatattcca
gtggccagaatgcggaagaaaatctaa
DBGET
integrated database retrieval system
