KEGG   Flavobacterium kingsejongi: FK004_19035
Entry
FK004_19035       CDS       T05683                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
fki  Flavobacterium kingsejongi
Pathway
fki03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FK004_19035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fki03019]
    FK004_19035
Messenger RNA biogenesis [BR:fki03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FK004_19035
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH-I_KHDC4-BBP DUF6550 KH_2 HTH_37 DUF4407
Other DBs
NCBI-ProteinID: AWG27162
UniProt: A0A2S1LU06
LinkDB
Position
4173499..4175064
AA seq 521 aa
MDSTLLIVIATIVGICVGFGIAKMIEKSNVSNLIKNAKKEAASILKDAKADAETEKKHKI
LQAKEKFIELKSEHEQVILGRDKKIAEAEKRTRDKESQISNELAKTKKVNDEAEAKISEY
NKKSELLEIKQAEVDKMHKSQVEQLETIAGLSADDAKNQLIDSLKAEAKSNAMSYIQDTL
EEAKLTAQQEAKKIIINTIQRVGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRAIEAA
TGVEIIVDDTPEAIILSCFDPVRREIARLALHKLVTDGRIHPARIEEVVAKTAKQIDDEI
IEVGKRTVIDLGIHGLHPELIKVVGRMKYRSSYGQNLLQHSREVAKLCGLMAAELGLNVK
LAKRAGLLHDIGKVPDTESDLPHAILGMQWAEKYGEKEEVCNAIGAHHDEIEMKSLLSPI
VQVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFNGVKNAYAIQAGRELRVIVESEKV
TDENAASLSFDISQKIQTEMTYPGQVKVTVIRETRAVNIAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggatagtacattactaatagttatcgccacaattgttggcatctgcgttggtttcgga
atcgctaagatgatcgaaaaaagcaatgtttcaaatttgattaaaaatgcaaaaaaagaa
gctgcttcaattttgaaagatgctaaagccgacgctgaaactgaaaaaaaacataaaatt
cttcaggcaaaagaaaaattcatagagctaaaatcagaacacgaacaagttatcttagga
agagataaaaaaatagcagaagccgaaaaaagaacccgcgataaagaatctcaaatctca
aatgaattagccaaaaccaaaaaagtcaacgacgaagcggaagctaaaataagcgagtac
aataaaaaatcggaacttctggagatcaaacaggcagaagtagacaaaatgcacaaaagc
caggtagagcagttggaaaccattgccggcctgtctgcagacgatgctaaaaaccaattg
atcgacagcctaaaagcggaagccaaaagcaatgcgatgtcttacatccaggacacactg
gaagaagctaagcttactgcacaacaggaagcgaaaaagatcatcatcaacacaatccag
cgagtgggcactgaagaagcagtagaaaattgcgtttccgtattcaacattgaatccgat
gatgtaaaaggacgtattattggacgtgagggccgtaacatccgtgctatcgaagcagca
acaggcgttgaaatcattgttgatgatactcctgaagcgattatcctttcctgctttgac
ccggttcgaagagagattgcccgtcttgcgttacacaaattagtaactgatggccgtatc
cacccagcccgaattgaagaagtagtagctaaaacagccaaacaaatcgatgacgaaatc
atcgaagttggaaaacgtaccgtaattgacttaggaatacacggattacaccctgaatta
atcaaagttgtaggccgaatgaaataccgttcttcttacgggcaaaatttactacaacac
tccagagaagttgccaagctttgtggattgatggcagcagaattaggcctgaatgtaaaa
ctggctaaaagagctggtctgttacacgatattggtaaagttcctgatacggaaagtgac
ctccctcacgcaatccttgggatgcaatgggctgaaaaatatggtgaaaaagaagaagta
tgtaatgctattggagcccaccacgatgagatcgaaatgaaatcactactttctcctatc
gttcaggtgtgtgatgcaatctcaggtgcaagaccaggtgcaagacgccaggtactggat
tcttatatccaacgattaaaagacctggaagatattgctttcggttttaacggggtaaaa
aatgcttatgctatccaggctggacgtgaactacgcgttatcgtagaaagcgaaaaagta
actgatgaaaatgcggcaagcctttcttttgatatttcacagaaaatccaaacggaaatg
acctatccaggtcaggtaaaagttactgttattcgcgaaacaagagcagtcaatatcgca
aaataa

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