Flavobacterium kingsejongi: FK004_19100
Help
Entry
FK004_19100 CDS
T05683
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fki
Flavobacterium kingsejongi
Pathway
fki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FK004_19100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fki03019
]
FK004_19100
03400 DNA repair and recombination proteins [BR:
fki03400
]
FK004_19100
Enzymes [BR:
fki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FK004_19100
Messenger RNA biogenesis [BR:
fki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FK004_19100
DNA repair and recombination proteins [BR:
fki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FK004_19100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
SgrR_N
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AWG27174
UniProt:
A0A2S1LTX9
LinkDB
All DBs
Position
4186942..4188834
Genome browser
AA seq
630 aa
AA seq
DB search
MQKAQEILKKYWKHEQFRGLQQPIITSVLGGNDTVGLMPTGGGKSVCFQIPALLNEGICL
VISPLVALIKDQVQNLQSKGIKAIAMTGGIKSDEMIDLLDNCQFGNYKFLYLSPERLQSD
WIMDRIKNLPISLIAIDEAHCVSQWGHDFRPAFLKIGGLKDHFPKIPFLALTASATPRVR
EDIITQLGMTAPNVFQSSFIRENIAYMVFETEDKLFRIEQILRKNPQPSIIYARNRKACH
ETAAQLQSLGFTATFYHGGLPPKEKEKNMNRWMSDQVQVMVATNAFGMGIDKPNVKTVIH
IHLPENLENYYQEAGRGGRNGEKSFAVLLTTQSDVLHAENQFIAVLPDKQFLKEAYIKLC
NYFQIAYGEGINEQFSFNLNQFCNIYKFPVLKTYNTFQFLDRQGIITLSQEFSEKVTIQF
IIDQKEVVRYMSLNRSDEEVLLALLRSYPGIHEMPSAINLAMIARKAKTTESFVKSVFER
LQQKKIIEYQAQSNDALLTFNEVREDDKTINRVTKYLERQNNLKKEQLQSVLHYVTTKDK
CKSRMILTYFGETELTDCGHCSYCITKNKPRNDYKKMADQFLELLSERALTSRDLLIITN
YREADIIFVLQLMLENKSIAINAVNQYYRR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcacaggaaatcctaaaaaagtactggaaacacgaacaattccgcggacta
cagcaacccatcatcacatcggttctcggcgggaatgacaccgtagggcttatgcctaca
ggaggtggaaaatcggtttgtttccagattccggctttactcaacgaaggtatttgccta
gtgatctctccattggtcgcactaatcaaggaccaggtacagaatctgcaaagcaaaggt
attaaagccattgccatgacaggcggtatcaaatccgatgaaatgatcgaccttttagac
aattgccaatttggaaattacaaattcctatacctttccccggaacgccttcagtcagac
tggattatggatcggattaaaaacctgcccatcagcctcatcgcgattgacgaagcccac
tgcgtttcccaatggggccatgatttccgcccggcctttctaaaaatcggtggactcaaa
gaccatttcccaaaaattcctttcttggcactgactgcttcggcaaccccaagggtacgg
gaagatattattacccaactcgggatgacagcccccaatgtattccagtcctcttttata
cgggagaatatcgcctatatggtttttgaaaccgaggataaactattccgcattgaacaa
atcctacggaaaaacccacagccatccattatttatgcccggaatcgcaaagcctgtcat
gagactgcagcccaactgcaatccctgggtttcacagcgacattctatcacggtggattg
cctccaaaagaaaaggagaaaaacatgaaccgctggatgagtgatcaggtacaggtaatg
gtagctaccaatgcatttggtatggggattgacaaacccaatgtaaaaacggtcatccac
atccacctgcctgaaaatctcgaaaactactatcaggaagccggacgcggcggcaggaat
ggagaaaaatcatttgccgtgctactcaccacccaaagcgatgtactccatgcagaaaac
caatttatagcagtcctgcccgataagcagttcctgaaagaagcttatatcaaactctgc
aattatttccagattgcctatggcgaaggaattaacgaacaattttccttcaatctgaat
caattttgcaacatttataaattcccggttcttaaaacctacaatacctttcaattcctg
gaccgacaaggtatcattacgttgtcccaggagttttcagaaaaagtcacaatacagttc
atcattgaccaaaaagaagtggtacgctacatgagcctgaaccgtagcgacgaagaagtc
ctcctggcattgcttcgaagttatcccggtatccacgaaatgccttccgcgatcaacctg
gccatgatagcccggaaagctaaaacaacagaatcttttgtgaagtccgtttttgaaagg
ttacaacaaaagaagattatagaataccaggcccaaagcaatgatgcccttttgacattt
aacgaagtccgggaagacgataaaaccatcaatagggttaccaaataccttgaaaggcaa
aacaacttaaaaaaagagcaactacaatccgtcctgcactatgttaccaccaaagacaaa
tgcaaaagccgcatgatcctcacctattttggcgaaacagaacttaccgactgtggccat
tgctcctattgcattactaaaaataagccacgcaacgattataaaaaaatggcagatcaa
ttcctggagctgctttccgaaagagctttaacatcaagagatctgctaattattaccaat
tatcgggaagcggatattatctttgtgctccagttgatgctggagaacaagagcatcgcc
attaatgcggtcaatcaatattaccgccgctaa
DBGET
integrated database retrieval system
