Fusarium keratoplasticum: NCS57_00102200
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Entry
NCS57_00102200 CDS
T09757
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS57_00102200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fkr03041
]
NCS57_00102200
Spliceosome [BR:
fkr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
NCS57_00102200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WDR54
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_VPS8
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
77679288
NCBI-ProteinID:
XP_052919611
LinkDB
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Position
1:3421667..3423226
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AA seq
519 aa
AA seq
DB search
MMHPSRQAYVEDAEPNQGIALEDLPDDHDYDLHMGGTGVAPEKASAILNQFNRKRLAATI
AVPTDDGRVRAKLREMGEPMTLFGEGPVDRRDRLRELLTIQAEMDGLESGDITMEDAADE
AQEEQEEEFYSRGGPELLKARIKLAEYSLPRAKKRVQFQKAESTIPLRTHVKFRKQIKER
LQAFELQGSQTVGERHVSMTRISPNGEMVAVGNWGGQVKLVEIPTLTEKMTFRGHTNKIS
GLSWFPGATLPENNISPDTVNLASGGAEGLVHLWSLNQDTPLSTLQGHSQRVCRIEFHPS
GRYLASASEDTSWRLWDVETTAEVLLQEGHSRGVYAVSFNTDGSLLASAGLDSIGRIWDL
RTGRTIMILDGHLDGHIKPIHALDWSSDGHRVLSGSADGWIKCWDVRKVQRTGGIGAHTS
AVSDMRWYKGLDDPLDGIPPGVDDKGAQLPKKSSTFFVSSGFDKNVKIFSADDWTLVQTL
SGHTGPVASVDYSRDGKWIVSGGHDRTVKLWGRNDGEGI
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatccatcgcggcaggcgtatgtggaggacgccgaaccgaaccaaggcatcgcc
ttagaggatctccccgatgatcacgactacgaccttcacatgggagggaccggtgtcgca
cccgaaaaagcttctgccattctcaaccagttcaatcgaaagcgactcgccgccacgatc
gctgtaccaaccgacgatggacgagttcgcgcgaagctcagagagatgggggaacccatg
actctctttggagaaggacctgtcgaccgccgagaccgattgcgcgagcttctcacgatc
caggccgagatggacggcttggagagtggtgacatcaccatggaggacgccgccgacgaa
gcgcaagaggaacaggaggaagaattctactcaagaggtggcccggagcttctgaaggcc
cgaatcaagctggccgagtactctctgccccgagcaaagaagagggtccagttccaaaaa
gccgagtcgactatacccctacgcacacatgtcaagtttcgaaaacagatcaaagaaagg
ttgcaagcttttgagcttcagggcagtcagacagttggagaacgacacgtcagtatgacc
aggatatcaccaaacggagagatggttgctgtgggcaactggggtggacaggtcaagttg
gttgagataccgaccttgacagaaaagatgaccttccgcggtcataccaacaaaatcagc
ggcctatcttggttccccggtgccactcttccagaaaacaacatttctcccgacacagtc
aacctggcatcaggcggcgctgagggcctcgttcatctctggtcactgaaccaggacacg
cccctgtcaactcttcagggccattcgcagcgagtttgtcgcatcgagttccatccttcc
ggacgttatctagcttccgcatctgaggatacttcgtggaggctttgggacgtggagact
acggccgaggtcctcctccaggagggtcactcgagaggtgtttacgctgtcagtttcaac
acggatggatcgttactggcaagcgccggtctggacagcattggaagaatctgggatctg
cgaaccgggcgcacaatcatgattctagatggtcatctcgatggccacatcaaacccatt
cacgctctagactggagctccgacgggcaccgggtcttgtctggatccgctgatggctgg
atcaagtgctgggatgtccgaaaggtgcagcggactggtggaattggtgcgcacaccagc
gctgtgtctgatatgcgctggtacaagggccttgatgatccgttggacggaataccccct
ggtgttgatgacaagggtgcccagctccccaagaagtcaagtacattctttgtttcaagc
gggttcgacaaaaatgtcaaaatcttctcggccgatgactggacgctggtgcagacgctc
agcggacatacgggaccggttgcgagtgtagattacagcagagacggaaaatggattgtc
agtggaggacatgaccgcacggtcaagctctggggccgcaacgacggtgagggcatctaa
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