Fusarium keratoplasticum: NCS57_00283700
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Entry
NCS57_00283700 CDS
T09757
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS57_00283700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fkr03041
]
NCS57_00283700
03009 Ribosome biogenesis [BR:
fkr03009
]
NCS57_00283700
Enzymes [BR:
fkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCS57_00283700
Spliceosome [BR:
fkr03041
]
Complex A
U2 snRNP components
U2 related factors
NCS57_00283700
Complex B
NCS57_00283700
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
NCS57_00283700
Ribosome biogenesis [BR:
fkr03009
]
Eukaryotic type
90S particles
Helicases
NCS57_00283700
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
Motif
Other DBs
NCBI-GeneID:
77681103
NCBI-ProteinID:
XP_052918101
LinkDB
All DBs
Position
2:3015493..3018028
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AA seq
605 aa
AA seq
DB search
MEPVKIQEQHNPVPADSLKRNETTAREAMRLEDGHLNPFAVSKPHCQAYFEGLAQRRHHR
CRRNWLLLVACTQPRVIAVTSVARRVAQELDVGLGDEFGYAVRFDNTSNDRTILKFLMDG
LLLQELRSDRELSRYACVMVDEAHERTKNTDLLLALLKQAMGMRPDLKVVVISATIDFTT
FSRYFPGSNVFHAEGHAYPVQIQYLREATPDYRKAVLETVAHITQTKPEGSILVFMTSVQ
EIEETCGLIRKKVPGLQVLPLYSSLSRAQMEDVMDTNTGRKCILSINTAENSLAIDGITF
AIVMEEVLVLKSCGFHKISNLNFVDGPHAETLLRALYELRALEYIDADAKLTTKGFMVVG
MPVDTAWYNAFLKVKELGCLAEIVTAACLLSTQDDITMRPNAPRYVADVIRQQYPDAKSD
HLARLNAFHSYIHRHIESASDEDKLARWCRMSFINPKVAEQALKMRNGLMPSVSKRMLDN
EPVLALEPSDPDFGLKIRQSLAADFYHKVVYLERRGTYKTVHENQPVLPKPDSCLVGEKY
EWVICDHISFAGMRYVTAIDPVWIMDLEHFQEKNLAYNFDGETLKYPYVKASLDLARATR
ASRSL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgtgaaaattcaggagcagcataatcctgtccctgctgacagcctcaagcgc
aacgagaccactgcgcgggaggccatgcgcctcgaagacggacaccttaacccgttcgcg
gtcagcaagccgcactgccaggcctactttgaaggccttgcccagcgccgtcaccatcgc
tgtcggaggaactggctgttgcttgtcgcctgcactcaacccagggtgattgcggtaacc
agcgtggcccggcgcgtggcccaggagctcgacgtgggcttgggtgacgagttcggttac
gccgttcggttcgacaacaccagcaacgaccgaacgatactcaagttcctaatggacggc
cttttgctgcaagagcttcgttctgatagagagcttagccgatatgcttgcgtgatggtg
gacgaggcccatgagaggaccaagaacaccgatcttctcttggcactcctgaagcaggcg
atgggaatgcggccagacctcaaggtcgtggtcatttcggcaacgatcgactttaccacc
ttcagcaggtactttcctgggtccaacgtgttccacgccgagggacacgcctaccccgtc
cagattcagtatctgcgggaggcgacgcctgattaccggaaggcggtgctggaaacggta
gcccacatcacgcaaaccaagcccgagggaagcatcttggtcttcatgacctctgtccag
gagatcgaggagacgtgcgggttgatcaggaagaaggtgcctggtctccaggtcttgcct
ctctactcgtcgctctcaagagcccaaatggaggatgtcatggacaccaacacgggtcga
aagtgcattctctcgataaataccgccgagaacagtttggctattgatggcattacattc
gcgatcgtcatggaagaggttctggttctgaaatcttgcggctttcacaaaatctccaac
ttgaactttgttgacggtccccatgcagagacactgctccgggctctctatgagctccgt
gccttggagtatattgatgccgatgccaagctcacgacaaagggctttatggtagtgggt
atgcctgtggacactgcctggtataatgcgttcctcaaggtcaaggagctcggctgtctc
gccgagattgtcaccgccgcgtgccttctcagcacgcaggacgacatcaccatgcggccc
aatgcgccgcgatacgtcgccgacgttattcggcagcaataccccgatgccaagtccgac
cacttggcacgactgaacgctttccacagctacattcatcgccacatcgagtctgccagt
gatgaagacaagctggctagatggtgtcgaatgtcgttcatcaacccgaaggttgcagag
caggccctcaagatgcgaaacggcctgatgccaagcgtgtccaaacgcatgctcgacaat
gagcctgtgctggcattggagccttccgacccggactttgggttgaagatccgtcagagc
ttggcggccgacttttatcacaaagtcgtctatctggaaagaaggggcacctacaagact
gtccacgagaaccagccagtcctccccaagccagatagctgcctggtcggcgagaagtat
gagtgggtcatatgtgatcacatttccttcgccggaatgagatacgtaacagctatcgac
ccggtctggattatggacctcgagcacttccaggagaaaaacctggcgtacaatttcgat
ggggaaaccttgaagtacccatatgtcaaggcctccctcgacctggcccgagccacaagg
gcatcgcgctctttgtag
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