Fusarium keratoplasticum: NCS57_00370000
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Entry
NCS57_00370000 CDS
T09757
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03022
Basal transcription factors
fkr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCS57_00370000
09124 Replication and repair
03420 Nucleotide excision repair
NCS57_00370000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fkr03021
]
NCS57_00370000
03400 DNA repair and recombination proteins [BR:
fkr03400
]
NCS57_00370000
Transcription machinery [BR:
fkr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCS57_00370000
DNA repair and recombination proteins [BR:
fkr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCS57_00370000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
77681966
NCBI-ProteinID:
XP_052915845
LinkDB
All DBs
Position
3:965238..966796
Genome browser
AA seq
496 aa
AA seq
DB search
MSVSPAPSLQLAEYLEKLPGTTFRKLYQQPSTAFAIFRRMLPHLAKTFVMRILYSPKPIL
LTDLDDWVKPSAKRQKDQALSILRVLYIVQITAPSKERPQEMQLTANFKTSLRLALSGGG
THNSFGVPSNLQVPPEIDIIFLDRYARRKWEDILHFVVSSVGYKSTSDVSGPNKSVKELL
IAGRLVDRKPNGMVGITQAGFTFLLQEANAQVWTLLLLWLEAMDVNKGAGLEATDMLSFL
FVLASMELGRAYDTNALTEQRKNMLPSLVDFGLIYIPNHKRSMFFPTRLATTLTSSGNSL
RSISDGVAAATAAALQPGQSGGTGGSTTGSGQEQRGSVIIETNYRIYAYTQSTLQIAVLA
LFSKLSMRFPDMVAGRLSRQSIRQAINFGITADQIISYLAAHAHDQMHRTAALNNKPVLP
PTVVDQIRLWQLENERMKTTSGFLFKDFEDHKEYMAVAGFAEEVGVLVWRNDVKGMFFAS
KHEQIRDYLRIRKKAE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcagcccggcgccgtcgctccagctggccgagtacctggagaagctccctggt
accacgttcaggaaactgtaccagcagccctcgacagcctttgccatcttccgccgcatg
ctgccgcacctggcaaaaacctttgtcatgcgcatcctctactccccgaagccgatcctc
ctcaccgacctcgacgactgggtcaagccgagcgccaaacgacaaaaggaccaggccctt
tccatcctgcgcgtcctctacatcgtccagatcacggcgccctcgaaagaaaggccgcag
gagatgcagctgactgccaacttcaagacttcccttcgactcgccctctccggaggtggc
acccataactcgtttggtgtgccctcgaacctccaggtcccccccgagatcgacatcatc
ttcctcgaccgctacgctaggaggaaatgggaggatattctacactttgtcgtgtccagt
gtcgggtacaagagcacgagtgacgtttccggacctaataagagtgtgaaggaactcctc
atcgcgggccgtctggtcgaccgcaaacccaacggcatggtgggcattacgcaggctggg
ttcacctttttgctacaagaggccaacgcacaggtctggacgctgcttctcctctggctc
gaggccatggacgttaacaagggcgctggtctcgaggccaccgatatgctgtcctttctc
tttgttctcgccagcatggaactaggccgcgcctacgacacaaatgcgctgaccgagcag
cgtaagaacatgcttccgtctcttgtcgactttggcctcatctacatccctaaccacaag
cgctccatgttcttcccgactcgtctagcaacgaccctcacttcaagcggcaacagcttg
cgcagcattagcgatggtgtagctgccgccacagctgctgctctccagccaggccaatct
ggtggaactggtggcagcacgacaggttctggccaggagcagcgtggcagtgtcattatc
gaaacaaactaccgcatttacgcctatacccagtcgaccctccagatcgccgttctggcc
ctcttctccaagctctcaatgcgcttcccagacatggtcgccggccgtctctcgcgccag
tcgatccgccaagccatcaactttggcatcacggccgatcaaatcatctcgtacctagcc
gcccacgcgcacgaccagatgcaccgcaccgccgcgctcaacaacaaacccgtcctgccc
ccgacggtcgtcgaccagatccgtctgtggcagctcgagaacgagcgcatgaagacgacg
agcggtttcctgttcaaggatttcgaggatcacaaggaatacatggccgtcgctggcttt
gctgaggaggtgggcgttttagtctggcgcaacgacgtcaagggcatgttctttgcgagc
aagcacgagcagattcgtgactaccttcgcattcgcaagaaggccgagtag
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