Fusarium keratoplasticum: NCS57_00456000
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Entry
NCS57_00456000 CDS
T09757
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS57_00456000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fkr03041
]
NCS57_00456000
03009 Ribosome biogenesis [BR:
fkr03009
]
NCS57_00456000
Enzymes [BR:
fkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCS57_00456000
Spliceosome [BR:
fkr03041
]
Complex A
U2 snRNP components
U2 related factors
NCS57_00456000
Complex B
NCS57_00456000
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
NCS57_00456000
Ribosome biogenesis [BR:
fkr03009
]
Eukaryotic type
90S particles
Helicases
NCS57_00456000
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
AAA_19
HA2_C
Helicase_RecD
ResIII
AAA_22
AAA_30
nSTAND3
UvrD-helicase
T2SSE
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
77682826
NCBI-ProteinID:
XP_052916678
LinkDB
All DBs
Position
3:4060068..4062457
Genome browser
AA seq
701 aa
AA seq
DB search
MASPDSTDMTVADVVSLEDAKENPLRPGSARSPKYFAMLEKRRRLPVMQGESFERFLDLY
HNNQVVVVTADTGSGKSTQLTQRIMYLELRKGLQVVCTQPRRVAARGVAERVAVEMDVRL
GDQVGVHHRDNNNTNAQTRLKFVTEGILLRQCQGDPLLSRYSCVIIDECHERTSDVDILL
ALIKKALGYRSGLKLVIMSATMKAHKFADYFGVSDIVEIQGRAFPVLIQHLQTPTPDYVE
LALRVVKHIHETKAPGNILVFLASANQIELAVSKLRGAISDLHVVPLYSSLPKDEQAKAF
CSSDKRMCIVATNVAETSLTIDGVVYVVDGGIEMQEGYNPRVGMMTLLSAPISQASAQQR
TGRAGRTQPGECFRLYTKDTFDNMLLKSTLPGLLKSDIKTQIMILKSAGINNVGAFDFLD
PPHAEVYLRGLQDLRAMNMIDGDGKITRAGTAAMQLPIAHAWYNAFAEALKLGCLDEMIS
IAALSSTRDSVFAKPHPQRYAAAAEHAQFAHPMSDHLSELAALYKYMQQGKLGDEKRAIW
CHETFLNVKSLGEALMIRKDLLEKCCVLFRIRTAPILSFDDKEYDVKIRKALARGFYHHA
AIIDDAAKDQYRTLDNFPVGVDPDSALVGMGWKWVVYHELGYTSYQYMDRCTAIELDWLL
DMVHFYPVNLPKDYNGNVRNKKIRAIFDKIGRPYHPPSQQS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccagactctaccgacatgacggttgccgacgtcgtaagtcttgaagatgcg
aaagagaaccctttgcgccctgggagtgcccggtctcccaagtattttgcgatgttggaa
aagcgccgccgcctcccggtgatgcagggcgagagcttcgagaggttcctcgacctctat
cacaacaaccaggttgtcgttgttactgctgatacgggctctggcaagtcgacccagctc
acccaacgcatcatgtacctcgagttgaggaaaggcctccaggtggtatgcacccagcct
cgaagggttgctgcacgaggtgtcgctgagcgggttgctgtcgaaatggacgtccgtctt
ggtgaccaagtgggtgttcaccaccgcgacaacaacaacaccaatgcacagactcgcttg
aagtttgtcaccgagggtattcttttgcgccagtgtcagggtgaccctcttctctcccgc
tactcctgtgttatcatcgacgaatgtcacgagcgcacctctgacgtggatatcctgctg
gccctcatcaaaaaggcacttggctaccggtcgggattgaagctggtcatcatgtcggct
acgatgaaggcgcacaagttcgctgactactttggtgtctctgatatcgtagagatccag
ggaagggctttcccagtcctgatccagcatctccagacgcctactccggactatgtcgaa
ctcgcattacgtgtcgtgaagcacatccatgagaccaaagctcccgggaacattcttgta
ttcctggcgtcggcgaaccaaatcgagctggctgtttcgaaacttcgtggtgccatcagc
gatctccacgtggtgccactatactcgtcactgcccaaggatgaacaggcgaaagccttc
tgttcgagcgacaagcgaatgtgtatcgtcgccaccaacgtcgctgagaccagcctcacc
attgatggtgttgtctacgttgtggatggcggcattgagatgcaggaggggtataaccct
cgggtgggcatgatgactcttctctctgctccgatatctcaagcgtccgctcagcagaga
actggccgggccggtcgtacccagccgggtgaatgctttcgcctctacaccaaggacacc
ttcgataacatgcttttgaaaagcacactcccgggccttctcaagagcgacatcaagaca
cagatcatgattctgaagagcgccggaatcaacaatgttggcgcatttgacttcctggat
ccgccccatgcagaggtctaccttcgtggtctgcaagacctcagggccatgaacatgatt
gatggtgatggcaagattactcgtgccggtaccgcagctatgcaactcccgatcgcgcac
gcttggtacaatgcattcgcggaggccctcaaacttggatgcttggacgagatgatcagc
attgcggccttgtcaagcacacgagattctgtctttgccaaaccccatccacaaaggtac
gctgctgctgctgaacacgcacagtttgctcatcccatgtcggatcacctgtccgaactc
gccgccttgtacaagtacatgcagcaaggcaaactcggagacgaaaagcgggcaatttgg
tgccatgagacgttcctcaacgtcaagtcgttgggtgaggctctgatgattcgcaaggac
ttgcttgaaaagtgctgtgtgctcttcaggataagaactgcacctatcctctcgttcgac
gacaaggagtacgacgtcaagatacgtaaagccctcgcccgtggcttctaccaccacgcg
gccatcattgatgatgctgccaaagatcaataccggacgcttgacaacttccccgtcggt
gttgaccccgacagcgctctggtgggaatgggttggaaatgggtagtgtatcatgagttg
ggctacaccagttatcagtacatggatcgatgcacagcaattgagctcgactggctcctg
gacatggtccatttctaccccgtgaaccttccaaaggactacaacggaaacgtccggaac
aaaaagattcgagcaatctttgacaaaatcggccgaccctaccaccccccaagccaacaa
tcctga
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