Fusarium keratoplasticum: NCS57_00574000
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Entry
NCS57_00574000 CDS
T09757
Name
(RefSeq) General transcription and DNA repair factor IIH
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03022
Basal transcription factors
fkr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCS57_00574000
09124 Replication and repair
03420 Nucleotide excision repair
NCS57_00574000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fkr03021
]
NCS57_00574000
03400 DNA repair and recombination proteins [BR:
fkr03400
]
NCS57_00574000
Transcription machinery [BR:
fkr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCS57_00574000
DNA repair and recombination proteins [BR:
fkr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCS57_00574000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
77684006
NCBI-ProteinID:
XP_052914607
LinkDB
All DBs
Position
4:complement(2150403..2151875)
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AA seq
469 aa
AA seq
DB search
MADSDGEYVADDMSDDDIMDHRVTDDDPKGAGGKSSRPHKKDRNATRAWEKSKRTWETNL
PEEDQDGLLSLTALEAEKRKRLLRDTTPLQRGIIRHLVLVLDMSFAMAEKDLLPTRYRLT
LRYAAAFVREFFEQNPISQLGIIGMRDGVAVRISDVGGNPAEHLERLKGLEDQDPQGNPS
LQNALEMCRGALFHAPSHGTREVLIIYGALLSSDPGDIHETVGNLITDRIRVSIVGLSAQ
VAICADLCSRTNAGDESQYNVAMDEVHFRELFLAATTPPVTRTAEQSTASLLMMGFPSRT
LVAGGDTSYCACHNRPFREGYLCTRCSARVCRLPAECPACGLTLILSTHLARSYHHLFPL
RNWVEVPWADAARSAACFSCQAPFPEPPKTKAPDKPKEDAGPKPAKGVSESGRYACEVCR
QHFCIDCDVFAHEVIHNCPGCQSIVQKMDGPVSAEPNGTAHSNGDVVMT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctgactccgatggcgagtacgtcgccgacgacatgtcggacgacgacatcatggac
caccgcgtcactgacgacgaccctaaaggcgccggggggaagtcttcgcgaccgcataag
aaggatcgtaacgcgacccgggcctgggaaaagtcgaagcgcacctgggagacgaacctc
cccgaggaggaccaggacgggctactgagcctgacggccctcgaggccgagaaacgcaag
cgcctgctccgcgacacgacaccgctgcagagaggcatcatccggcacctggtgctcgtg
ctcgacatgtcgttcgccatggcggaaaaggatctgctgcctacgcggtaccgcctcacg
ctgaggtacgccgccgcctttgtccgcgagttctttgagcagaaccctatatctcagctt
ggaatcattggcatgcgcgacggtgttgcggtgaggattagtgatgttggggggaacccg
gctgagcacctggagcggttgaagggcttggaggatcaggaccctcagggcaacccgagt
ctgcagaacgctctggagatgtgccggggagctctattccacgcgccatcacatggcact
cgagaggtgcttatcatttacggcgccctactatcgagcgacccgggcgacatccacgag
acggttggcaacctcattacggaccggatacgtgtgtccatcgtcggactgtcagcacag
gtggccatctgcgctgacctctgctcgaggacaaatgccggcgacgagtcgcagtataat
gtggccatggacgaggtgcacttccgtgagctcttcctcgccgccaccacgcccccggtc
actcggaccgctgagcagagcacggcaagcttactcatgatgggcttcccgtcccgtaca
ctcgtggccggtggcgatacaagctactgcgcctgtcataaccgacccttccgcgagggc
tacctatgcacacgctgttccgcccgcgtctgtcgcctccccgccgagtgtcctgcctgc
gggctcaccttgattctttccacccatctcgctcgctcttaccaccacctgttccctcta
cgaaactgggtcgaggttccttgggctgacgccgcccgctccgcagcctgcttctcctgc
caggcgccatttcctgaaccgccaaagacaaaggcccctgataagcctaaggaggatgcg
ggacccaaaccggcaaaaggcgtcagcgagagcggccgctacgcgtgtgaggtgtgccgg
cagcacttttgcatcgactgcgatgtgtttgcccacgaagtcatccacaactgcccgggc
tgccagagtatagtccaaaagatggatggtcccgtttcggctgagccgaacggtacggcg
cacagcaacggcgatgtagtcatgacatag
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