Fusarium keratoplasticum: NCS57_00599400
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Entry
NCS57_00599400 CDS
T09757
Name
(RefSeq) RRM domain-containing protein
KO
K12881
THO complex subunit 4
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03013
Nucleocytoplasmic transport
fkr03015
mRNA surveillance pathway
fkr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS57_00599400
09122 Translation
03013 Nucleocytoplasmic transport
NCS57_00599400
03015 mRNA surveillance pathway
NCS57_00599400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fkr03019
]
NCS57_00599400
03041 Spliceosome [BR:
fkr03041
]
NCS57_00599400
Messenger RNA biogenesis [BR:
fkr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NCS57_00599400
TREX complex
NCS57_00599400
Spliceosome [BR:
fkr03041
]
Complex C
Other components
EJC/TREX
NCS57_00599400
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NCS57_00599400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
77684260
NCBI-ProteinID:
XP_052914851
LinkDB
All DBs
Position
4:complement(3004536..3006060)
Genome browser
AA seq
316 aa
AA seq
DB search
MADKMDRGLDEIIAETRSNRPRNQRGQGRRREPRQDYPRDGVRKSFRDESRNLDSEWVHD
RYEENNSRRGPAPRRRRESPDQESRGSKLRVDNIHYDLTEDDLDELFRRIGPVVRLQLRY
DRAGRSEGTAYVTYELKEDAQEAVRQFDGANANGQPIRLTLLPSGPARNPFDTAVMPSRP
LAERISAPGDRARSHSPHRRYDEDEAARKGIDRYVPGQGGDRRSPMPRRRGQGGRRPGAR
REGGGREGGRDQEGGRGGRGNPRTKKTQEELDAEMADYFGGGNAQTTEPSNGTEAAPAQA
QAQAPAAAVDDIDMIE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatggaccgtggccttgacgagatcatcgccgaaactcgcagcaatcgg
cctcgcaaccaacgcggccagggtcgccggcgtgagccgcgccaggattaccctcgcgac
ggcgtcagaaagtccttccgagacgaatcgcgaaacctcgacagtgaatgggtccatgac
cgatacgaagagaacaacagtcgcagaggacccgctccacgccggcgccgcgagtctcct
gaccaggagtccagaggctcaaagctgcgagtcgataacatccactatgacctcaccgag
gatgaccttgatgagctcttccgcagaattggccctgttgttcgacttcaattgcgatat
gaccgcgcgggacgatccgagggaacggcctacgtgacctacgagctgaaagaagacgct
caagaggcggtccgacagtttgatggcgccaatgccaacggacaaccgattcgattgacc
cttcttcccagtggccctgctagaaaccccttcgatacagctgtcatgcccagccgcccc
ttggcagagcgcatttcagccccaggagacagggcgcgatctcattccccacaccgccgg
tacgacgaggacgaagcagcccgcaagggaattgatagatatgttcctggacaaggaggt
gaccggaggagcccaatgccccggcggcgcggccagggtggtcgtcgtcccggagctcgt
agagagggtggtggcagagagggaggaagggatcaggagggaggtcgtggtggacgaggt
aaccctcgtacaaagaagacgcaggaggagctggatgcggaaatggcggactactttggc
ggaggcaacgcgcaaaccacggagccatccaacggaaccgaggcagcccctgcccaggct
caggctcaagctccagccgctgcggtcgacgatatcgacatgattgagtaa
DBGET
integrated database retrieval system