Fusarium keratoplasticum: NCS57_00694900
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Entry
NCS57_00694900 CDS
T09757
Name
(RefSeq) General transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03022
Basal transcription factors
fkr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCS57_00694900
09124 Replication and repair
03420 Nucleotide excision repair
NCS57_00694900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fkr03021
]
NCS57_00694900
03400 DNA repair and recombination proteins [BR:
fkr03400
]
NCS57_00694900
Transcription machinery [BR:
fkr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCS57_00694900
DNA repair and recombination proteins [BR:
fkr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCS57_00694900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Rogdi_lz
Motif
Other DBs
NCBI-GeneID:
77685215
NCBI-ProteinID:
XP_052913011
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Position
5:912759..913826
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AA seq
355 aa
AA seq
DB search
MDAVDVSEHYEVSTREDTPSLLTIVLDTNPRAWAAIGNVLPLSRAIANILVFVNAHLAFS
NANQVALIAAHVDRAQWLYPTPPKPTRDASGDVSMKDAAPAQTSSANKFPQFAQIEAAVL
DSVRKLMDQTTEADLATTTTQLSGALTLALCHINKAAQALCSPTANLEDSHKATTTAPPT
VRGRILVISVSDSEPSQYIPTMNAVFAAAHAQVAIDTLSLTGDPTFLQQACFNTGGTYLA
ATHPQGLLTYLMFGLIADTEAREALVAPTHDTVDFRAACFCHGRVVDTGFVCSICLSIFC
ELPENSECLTCGTKLSLGNYGAKPAVVPRKKKKKRRIVNGGSREETGSATGTPRP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcgatgtttcggagcactacgaggtcagcacccgcgaggacacgccctcc
ctccttaccatcgtccttgacacgaatccgcgagcatgggctgccatcggtaatgtccta
cctttgtccagggccatcgcaaatatcctcgtctttgtcaacgcccatctcgccttcagc
aacgccaaccaagtcgccctcatcgccgcccacgtcgaccgcgcacaatggctctacccg
acgccgcccaagcccacccgcgatgcctcgggcgatgtatctatgaaggacgccgccccg
gctcagacgtcgtcggccaacaagttcccccagtttgcgcagatcgaagctgccgtcctg
gactctgtgaggaaactcatggatcagacgaccgaggctgacctcgccaccaccacgaca
caactatcaggggcattaacgctggccctctgccacatcaacaaggctgcgcaagctctc
tgctcgcccaccgccaaccttgaggacagccacaaggccaccaccacggcacctcccacc
gtacgcggccgcatcctcgtcatctccgtgtccgactcggagccttcgcaatacatccct
accatgaacgccgttttcgccgccgcccacgcccaggtcgccatcgataccctctccctc
accggcgacccgacctttctacagcaggcctgcttcaacacgggcggcacatacctcgcc
gcaacacatccccagggtctgctcacctatctcatgttcggcctcatcgccgatacagag
gctcgcgaggctctcgtcgcgccgactcatgacacagtcgactttcgcgcggcgtgcttc
tgccacggccgagttgttgacactggctttgtctgttccatctgcctcagcatcttttgc
gagctgccagagaattccgagtgccttacatgtggcacgaaattgtcgctgggcaactac
ggcgccaagcccgccgtcgtgcctcggaagaagaagaagaagcggagaatcgtcaacggg
ggttcacgggaagagacggggagtgcgacggggacacctcgtccttga
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